Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0252 ATGTCTCCTGCAATGGCAATAAAGGAGCACAGGAGCGAGGATGATACCCCAGAAGGTCAATATCAGAAAGGAGTGAAGCAGCTATATGAGAAAGGCCATCTTCACTCGGTACCTAAGAAGTACATACTTCCTGCTTCCGAGAGACCCACCAAAAGTGTGGAAGATCCAAATGTTGCCAAGCAAAACCTTCAGTTACCCATCATTGATTTTGCCGAATTGATTGGCCCAAATAGGTCTCAAGTCCTTCAATCTCTAGCCAATGCCTGTGAACAATATGGATTTTTCCAGCTGGTAAATCATTGTGTCTCAGACGATGTAGTAAGGAGCATGATAGATGTGAGTGGGAGGTTCTTCGATCTCCCTTTTGAGGAGAGAGCAAAGTACATGACAACAGATATGCGGGCACCAGTTCGATGTGGGACTAGTTTCAGCCAAACTAAAGACACAGTGATGTGTTGGAGGGATTTCTTGAAACTCTTGTGCCATCCCTTGCCAGATTTCCTCCCTCATTGGCCTGCTTCCCCAGTGGACTTTCGGAAAGTTGTGGCGACCTATGCAGAAGAAACCAGACATTTGTTCCTGGTGGTAATGGAAGGCATCCTAGAGAGTTTAGGAATTATGGAAGCTAACGATGAAGAGGAAAATATCATGAAAGACTTGGGCAATGGTAGCCAGATGATGGTGGTGAATTTCTACCCACCATGCCCTGAACCAGACCTTACCCTTGGGATGCCCCCTCACTCCGATTATGGCTTCCTCACACTTCTCTTACAAGACCAAGTTGAAGGTTTGCAGATCCAATTCAAAGACAAATGGGTCACTGTTCAACCTATTCCAAACGCCTTCGTTGTCAATATTGGTGATCACTTAGAGATATTCAGCAACGGAAGATACAAGAGTGTATTGCACAGGGCTGTGGTGAATGAAGCTAAGAGTAGGGCATCGGTGGCTTCGTTGCATAGCCTTCCCTTCAACTGCACAGTGAGACCGTCGCCAAAACTCATAGATGAAGCCAATCCCAAGCGTTACATGGACACAAATTTTGATAGTTTTCTTGCGTACGTATCCACCAGAGAACCCAATAAAAAGGACTTCTTGAACTCTAGAAAGTTGACTTTTCCTTAA 1125 0.4507 MSPAMAIKEHRSEDDTPEGQYQKGVKQLYEKGHLHSVPKKYILPASERPTKSVEDPNVAKQNLQLPIIDFAELIGPNRSQVLQSLANACEQYGFFQLVNHCVSDDVVRSMIDVSGRFFDLPFEERAKYMTTDMRAPVRCGTSFSQTKDTVMCWRDFLKLLCHPLPDFLPHWPASPVDFRKVVATYAEETRHLFLVVMEGILESLGIMEANDEEENIMKDLGNGSQMMVVNFYPPCPEPDLTLGMPPHSDYGFLTLLLQDQVEGLQIQFKDKWVTVQPIPNAFVVNIGDHLEIFSNGRYKSVLHRAVVNEAKSRASVASLHSLPFNCTVRPSPKLIDEANPKRYMDTNFDSFLAYVSTREPNKKDFLNSRKLTFP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0252 374 Gene3D - 18 354 IPR027443 -
Apr4g0252 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 163 IPR026992 -
Apr4g0252 374 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g0252 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 371 - -
Apr4g0252 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 322 IPR005123 -
Apr4g0252 374 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 15 371 - -
Apr4g0252 374 Pfam 2OG-Fe(II) oxygenase superfamily 225 320 IPR044861 -
Apr4g0252 374 SUPERFAMILY Clavaminate synthase-like 26 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0252 Apr-Chr4 2146121 2148682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0252 9 351 Glycosyltransferase AT5G59530 32.955 1.38e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0252 - - gmx:100778488 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0252 4 2146121 2148682 Apr4g0252 4 2146121 2148682 ECH
Apr4g0252 4 2146121 2148682 Apr8g0921 8 10427611 10430085 PCT