Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0880 ATGGCTTTTCCTCTTCCTGTGGTTGACTTCAACGATGAAAACCTCAAGCCTGGTAGCGAAGCATGGCATTCAGCTTGTGACGTAGTGAGAACTGCACTAGAGGATCATGGATGTTACATTGCACGCTACCACAAAATTGATGAAGAGCTTCGAAACTCTGTTGTCTCTGCAATGGAGAGAGTATTTGTACTTCCTTTGGAAACGAGAAAACAAGAGACTAGTGACAAGCCTTTCCATAGCTACATTGGGCAATTCGCCAATTTTCCCCGCTATGAATCGGTGGGCATAGAAGATCCATTGACTATTTCTGCGTGTAAAAATTTCGAACACATAATGTGGCCACAAGGAAATGACCGTTTCAGTGAAATTCTCAATGAGTATGCGAAGCTGTTGGCAGATTTTGACGGTGTGACGAAGCGAATGGTGATTGAGAGCTATGGTGTGGACATGAAACACTGCGATTCTATCATAAAATCAACCAATTATCTTCTTCGCTGCTTCAAGTACAGAGTAACCCAAAGCGATGAGAGTAATTTGGTACTTAATCCTCACACTGACTTGAGCTTCACTTCCGTAATGCATCAGCTGAATAACATTAATGGCTTGGAAATCAAATTGAAGAATGGAGAGTGGTACAACGTTGATGCCTCACCCTCCTTCATCGTCGTCATGGCCGGCGATGCTTTTCAGTGTTGGAGTAATGGCAGGATACGTTCATGCGAACACCGAGTTACGATGAATGCGAAGAAAATAAGGTTGTGCATGGGATTCTCATCTTTTTGTAGTGAGATGATGCAGATACCAAAGGAGCTAGTTGATGAGAAACATCCCTTGGGTTATAAACCACTTGACCATTATGGGTACCTTCGTTTCTTTGAGAAAGAGAAAATCAAAGAAACAAATCCTCGATTAAAAGCGTATTGTGGGGTATAA 933 0.4234 MAFPLPVVDFNDENLKPGSEAWHSACDVVRTALEDHGCYIARYHKIDEELRNSVVSAMERVFVLPLETRKQETSDKPFHSYIGQFANFPRYESVGIEDPLTISACKNFEHIMWPQGNDRFSEILNEYAKLLADFDGVTKRMVIESYGVDMKHCDSIIKSTNYLLRCFKYRVTQSDESNLVLNPHTDLSFTSVMHQLNNINGLEIKLKNGEWYNVDASPSFIVVMAGDAFQCWSNGRIRSCEHRVTMNAKKIRLCMGFSSFCSEMMQIPKELVDEKHPLGYKPLDHYGYLRFFEKEKIKETNPRLKAYCGV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0880 310 SUPERFAMILY Clavaminate synthase-like 4 296 - -
Apr8g0880 310 Pfam 2OG-Fe(II) oxygenase superfamily 165 257 IPR044861 -
Apr8g0880 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 83 IPR026992 -
Apr8g0880 310 Gene3D - 4 308 IPR027443 -
Apr8g0880 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 309 - -
Apr8g0880 310 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 309 - -
Apr8g0880 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 263 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0880 Apr-Chr8 9406662 9410320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0880 126 281 Glycosyltransferase AT5G59530 30.435 1.68e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0880 - - aprc:113873748 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0880 8 9406662 9410320 Apr4g1265 4 11512401 11515087 PCT