Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0878 ATGGATCATGTAAGTAATGAGGCTAATGTTGACCCTTTTGCAATTGGGCCTTCAAGCATTCTTGGGAGGTCAATTGCTTTCAGGGTTCTTTTCTGCAAGTCTATCTCACATTTGAGGCATCAAATATTTTTCGTGTTGATGAATGTATTCCATAGGTTTAGGGGATTTTGGGTACCCATTGTGTCATGGTTTCATCCAAGAAATCCACAGGGGATATTGGCAATGATGACAATAGTTGCTTTCGTATTGAAACGGTACACGAATGTTAAGGTAAGGGCTGAGATGGCATATAGGAGGAAGTTTTGGAGAAATATGATGACAACTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAGATGCTTGACAGAGAGACACCAAAGATGAATGAAGCAGACCTCTATGATGTAGAGTTGGTAACAAACAAGCTTGGAGAGCTTCGTCATCGCCGGCAAGAGGGGTCTATTAGAGATATAACATTTCGTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGATCTCCACAAGGGTAGGCTTCAGGTGCCAAGACAGATCAAGGAGTATATTGATGAAGTATCAACTCAATTGAGGGTGGTTTGTAACTCTGATTCGGAGGAGCTTGCGTTGGAAGAAAAGCTTTCTTTCATGCATGAAACTAGGCATGCGTTTGGGAGGACTGCTTTGCTGTTAAGTGGGGGTGCTTCCCTTGGAGCCTTTCATATTGGTGTGGTAAAAACACTCGTAGAACATAAACTTATGCCTAGGATCATTGCTGGTTCAAGTGTAGGATCAATTATGTGTTCTGTTGTTGCCACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGGATTCATGGCACTCATTACAGTTTTTTGATCAAATGGGTGGGATTTTTACGGTTGTGAAGAGGGTAACAACATATGGTGCAGTTCACGAGATCAGACAGTTGCAAATGATGCTGAGGCATTTAACAAGCAATCTTACATTTCAAGAAGCTTATGACATGACCGGTCGAATTCTTGGGATTACAGTTTGCTCCCCCCGAAAGCATGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGCGCATTTCCCGGACTTTTTGAGGCTCAGGAATTGATGGCAAAGGATAGAACTGGAGAGATTGTTCCTTATCATCCTCCATTTAATTTGGATCCTGAGAAGGGTTCCACACCGGTGCGCCGTTGGAGGGATGGGAGTTTAGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCACTTTATAGTTAGTCAGGCCAATCCTCATATTGCACCATTATTGAGAATGAAAGAATTTATACGAGCTTATGGCGGTAATTTTGCAGCCAAGCTTGCTCATCTAGTAGAAATGGAGGTGAAACATAGATGTAATCAAGTACTGGAACTCGGCTTTCCATTAGGTGGACTTGCCAAGCTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCTTGCTCAGTACTTAAAAATCATACAGAACCCCTCTTATGTAGAGCTTCAAAAGGCAGCTAATCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCGGCCATAAAAGCAAATTGTGGAATTGAGCTTGTTCTTGATGAGTGTGTTGCTCTTCTCAATCATATGAGACGACTCAAAAGAAGTGCTTTAAGAGCTGCAGCTGCATCGCATGGTCTGCCCAGTACTGTCAAATTCAGTGCTTCAAGAAGAATTCCATCGTGGAACGTCATTGCACGAGAGAATTCTACAGGCTCCATTGATGAAGACATTCTTGCAGATGCTGCTTCCTCATTCCATCAAGGTGTTAATAGCTTCAGCGGAGCCGCTGGTAAAAATTGGAAGTCCCGTGGCGTGGATGCAAGTGACAGTGAATCTGAAAGTGCTGACTTGAATTCTTGGACCAGATCTGGGGGGCCTTTGATGAGAACTACATCAGCAAACACATTCATTGACTTTGTCCAAAACTTAGAAGTTGATACTGAACTAAATGCAGGCTTGGTGACTCATACTAGCCCTCGTGATTTTCAGCATTACAGTTCAAGGCTCGCAACACCAGATAATAGCTCTGAGTACACAGAATTTGATCTCAAAGAACATGGCAACAGGGTTGTCATGAATGGATCTACTATAATGGTGACTGAAGGTGATCTTCTACAGCCTGAAAGGATCCATAATGGGATTGTATTTAATGTTGTCAAGAAAGAAGACTTGTCAACTTCAAATAGGACTCATGTTTATGATAGTTTTAACAATGAAGTTGCTGAATGTGTACAAATTGATTGTCCAGGGAAGGAGATGGATGATGCTAGCTCAGCTTCTGAAAATGGCGGTGATGGGTCTACAACCACAGATCATTCTGGCAATTATTTGGGTAAGGATCAGAGCATGTTGACAGTTAGTTCCCAAGATTCTCCCCGTTTGCTTTAA 2517 0.4255 MDHVSNEANVDPFAIGPSSILGRSIAFRVLFCKSISHLRHQIFFVLMNVFHRFRGFWVPIVSWFHPRNPQGILAMMTIVAFVLKRYTNVKVRAEMAYRRKFWRNMMTTALTYEEWAHAAKMLDRETPKMNEADLYDVELVTNKLGELRHRRQEGSIRDITFRMRADLVRNLGNMCNPDLHKGRLQVPRQIKEYIDEVSTQLRVVCNSDSEELALEEKLSFMHETRHAFGRTALLLSGGASLGAFHIGVVKTLVEHKLMPRIIAGSSVGSIMCSVVATRSWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTYGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRTGEIVPYHPPFNLDPEKGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRMKEFIRAYGGNFAAKLAHLVEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYLKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCGIELVLDECVALLNHMRRLKRSALRAAAASHGLPSTVKFSASRRIPSWNVIARENSTGSIDEDILADAASSFHQGVNSFSGAAGKNWKSRGVDASDSESESADLNSWTRSGGPLMRTTSANTFIDFVQNLEVDTELNAGLVTHTSPRDFQHYSSRLATPDNSSEYTEFDLKEHGNRVVMNGSTIMVTEGDLLQPERIHNGIVFNVVKKEDLSTSNRTHVYDSFNNEVAECVQIDCPGKEMDDASSASENGGDGSTTTDHSGNYLGKDQSMLTVSSQDSPRLL* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0878 838 Gene3D Cytosolic phospholipase A2 catalytic domain 229 309 - -
Apr8g0878 838 Gene3D Cytosolic phospholipase A2 catalytic domain 310 494 - -
Apr8g0878 838 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 714 - -
Apr8g0878 838 MobiDBLite consensus disorder prediction 641 667 - -
Apr8g0878 838 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 714 - -
Apr8g0878 838 MobiDBLite consensus disorder prediction 803 838 - -
Apr8g0878 838 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Apr8g0878 838 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Apr8g0878 838 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Apr8g0878 838 MobiDBLite consensus disorder prediction 795 838 - -
Apr8g0878 838 Pfam Patatin-like phospholipase 233 426 IPR002641 GO:0006629
Apr8g0878 838 CDD Pat_SDP1-like 163 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0878 Apr-Chr8 9337212 9341149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0878 4 834 Acyl Lipid Metabolism Gene Families AT5G04040 72.401 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0878 K14674 - gmx:100817268 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0878 8 9337212 9341149 Apr8g0878 8 9337212 9341149 ECH
Apr4g1268 4 11540122 11545307 Apr8g0878 8 9337212 9341149 PCT