Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0877 ATGGCTTTTCCTCTTCCTGTGGTTGACTTCAACGATGAAAACCTCAAGCCTGGTAGCGAAGCATGGCATTCAGCTTGTGACGTAGTGAGAACTGCACTAGAGTATCATGGAGGTTACATTGCACGCTACCAAATTGATGAAGAGCTTAGAAACTCTGTGGTCTCTGCAATGGACCAACTATTTGAACTTCCTTTGGAAACTAGAAAACAAGAGACTAGTGACAAGCCTTTACATAGCTACTTCGGGCAAATCCCCTTTATTCCCCTCTATGAATCGGTGGGCATCGACGATCCATTGACTATCTCTGGATGTCAAAAATTCGAACACATAATGTGGCCACAAGGAAATGATCGTTTCAGAGAAAGTGTCATTGAGTATGCGAAGCTGTTGGCAGAATTTGAGCGTGTGACGAAGCGAATGGTGAGTGAGAGCTATGGTGTGGACATGAAACACTGCGATTCTATCATAAAATCAACCAATTATCTTCTTCGCTGCTTCAAGTACAGAGTACCCCAAACGGGTGAGGGTAATATGGGAATTCATTCTCACACTGACACGAGCTTCACTTCCGTAATGCATCAGCTGAATAACATTAATGGCTTGGAAATCAAATTGAAGAATGGAGAGTGGTACAACGTTGATGCCTCACCCTCCTTCATCGTCGTCATGGCCGGCGATGCTTTTAAGTGTTGGAGTAATGGCAGGATACGTGCATGCGAACACCGAGTTACGATGAATGCGAAGAAAATAAGGTACTCGATGAGATTGTCATCTTATTGTAGTGAGATGATGCAAATACCAAAGGAGCTAGTTGATGAGAAACATCCCTTGGGTTATAAACCATTTGACCATTATGGGTACCTTCGTTTCTTTGACAAAGAGAAAATCCTAGAACCAAATTCTCGATTAAAAGCGTATTGTGGGGTATAA 930 0.428 MAFPLPVVDFNDENLKPGSEAWHSACDVVRTALEYHGGYIARYQIDEELRNSVVSAMDQLFELPLETRKQETSDKPLHSYFGQIPFIPLYESVGIDDPLTISGCQKFEHIMWPQGNDRFRESVIEYAKLLAEFERVTKRMVSESYGVDMKHCDSIIKSTNYLLRCFKYRVPQTGEGNMGIHSHTDTSFTSVMHQLNNINGLEIKLKNGEWYNVDASPSFIVVMAGDAFKCWSNGRIRACEHRVTMNAKKIRYSMRLSSYCSEMMQIPKELVDEKHPLGYKPFDHYGYLRFFDKEKILEPNSRLKAYCGV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0877 309 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 308 - -
Apr8g0877 309 Gene3D - 2 306 IPR027443 -
Apr8g0877 309 Pfam 2OG-Fe(II) oxygenase superfamily 160 254 IPR044861 -
Apr8g0877 309 SUPERFAMILY Clavaminate synthase-like 4 294 - -
Apr8g0877 309 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 158 261 IPR005123 -
Apr8g0877 309 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0877 Apr-Chr8 9321273 9324817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0877 120 280 Glycosyltransferase AT5G59530 30.723 1.38e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0877 - - aprc:113873748 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1265 4 11512401 11515087 Apr8g0877 8 9321273 9324817 PCT