Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0871 ATGGGATCCCAAACACAGTCTCAGCTTCCCGTTATAGACTTCACTAACCCAAACCTGAAACCTGGTAGTGACAAATGGGTTTCAGCTTGTCAAGCAGTGCGTAGTGCACTTGAGGATCATGGTGGTTTCTTGGCACTCTATCATAAGGTTGTTTCCGAGACATACAATTCTGTTTACTCTGCAATGGAACATTTTTTTGACCTCTCAATAGAAACAAAACGCAGAAAGACCACTGAAAAACCCATATTTAGCTACTCTGGGCAGCGATCTGGGATTCCTTTATATGAATCTGTGGGTATCGTTAACCCACTTAGCATGGAGGATTGTCAGCGATTTACACACATTATGTGGCCTCGAGGAAATGTTCATTTCTGTGAAAGTGTTAATTCATATGCAAAGCAACTAGTGGAATTGGACCATATTGTGAAGAGGATGTTGTTTGAGAGCTATGGAGTGGAGAGGAAGAAATTTGAGTCTTTACTTGATTCAACTGAGTACGTGCTCCGTGGCTACAAATACAGAATCCCCCAAGTTGGTGAGAGCAATTTGGGAGTGGCTCCTCATTCTGACACTGCTTTTCTAACAATATTGAATCAGAAGGTAGAAGGCTTGGGAGTCAAATTGAAGGATGGGGAATGGTTTGAAGTGGGTGCCGCACCCTTACTCTATTTGGTAATGGGTGGCGATGCACTCATGGTTTGGAGTAATGACAGGATACCAGCTTGTGAACATAGAGTTATAATAAATTCAAAGATAGACAGATACTCCATGGGACTACTTTCATATGCTGGTAAGATAATGGAACCAGAAGGGGAGCTAGTTGATGAAGAACATCCTCTACGTTATAAACCATTTGACCATTATGGATACCTCCGTTTCTTTCTCACAGAAGAAGCCATAAAATCTGATTCCCGGATCAAGGCATTTTGTGGCATTTCAGACATATTTTGTGGTGTGAATTAA 963 0.4164 MGSQTQSQLPVIDFTNPNLKPGSDKWVSACQAVRSALEDHGGFLALYHKVVSETYNSVYSAMEHFFDLSIETKRRKTTEKPIFSYSGQRSGIPLYESVGIVNPLSMEDCQRFTHIMWPRGNVHFCESVNSYAKQLVELDHIVKRMLFESYGVERKKFESLLDSTEYVLRGYKYRIPQVGESNLGVAPHSDTAFLTILNQKVEGLGVKLKDGEWFEVGAAPLLYLVMGGDALMVWSNDRIPACEHRVIINSKIDRYSMGLLSYAGKIMEPEGELVDEEHPLRYKPFDHYGYLRFFLTEEAIKSDSRIKAFCGISDIFCGVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0871 320 SUPERFAMILY Clavaminate synthase-like 6 297 - -
Apr8g0871 320 Pfam 2OG-Fe(II) oxygenase superfamily 180 257 IPR044861 -
Apr8g0871 320 Gene3D - 1 301 IPR027443 -
Apr8g0871 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 311 - -
Apr8g0871 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 86 IPR026992 -
Apr8g0871 320 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0871 Apr-Chr8 9207262 9209358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0871 3 283 Glycosyltransferase AT5G59530 26.531 9.43e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0871 - - gmx:100789342 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1263 4 11486208 11487940 Apr8g0871 8 9207262 9209358 PCT