Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1263 ATGATGGTGTCAGAAACACAGGCTCAGGCGCCTCTACCTGTTATTGATTTCGCTGATGAAAACATGAAACCTGGTACTGACACATGGGTTTCATGTTGTAAAGTTGTGAGAAGTGCATTCGAGGATCACGGTGGATTCCTAGCACTCTACGACAAGGTTGATCCACTGCTCTATGACTCTGTCTTCTCTTCAATGGAACAACTCTTTGATCTTCCATTAGAAACAAAAATGCAACCCACCACTGATAAGCCTATCTATAGCTATGCTGGTCAACGCCCTGATATTCCTTTGTATGAATCCATGGCCATTGACAACCCATTAAGTGCAAAAGATTGCCACAAGTACACAACTATTATGTGGCCACAAGGGAATCACAGTTTCAGTGAAAGTGTCAGTTCCTATACAAAGAAAGTGGCAGAATTAGATTACATTGTTAAGAGAATGGTGTTTGAAAGCTATGGGCTGGACAATCAGAAATGTGAGTCTTTGATTGAATCAACTGATTATGTGCTCAGATGCTACAAATACAGAACACCGAAGGTGGGTGAGACCAATGCAGGAGTGCATCCTCATACGGACTCAGGCTTCCTAACTATTCTGAATCAGAGGTTAAATGGCTTAGAAATACAATTGAAGGATGGAGAGTGGTTCCAGGTTGATGCCTCACCTTCTATGTTTGCTGTCTTGGCTGGTGATGCATTCATGGTTTGGAGTAACGACAGGATACGAGGATGTATGCACCGAGTATTCATGAATTCAAATGTAGACAGATACTCCTTAGGGTTGCTTTCATATGCTGGTAAGGTGATGGAGCCACAGGAAGAGCTAGTGGATGAGGAACATCCTCTTCGTTACAAACCATTTGACCATTATGGATATCTTCGTTTCTTTCTCACTGAAGAAGCTGTAAAATCTGCATCTCGGATCAAAGCATATTGTGGTGTTTGA 948 0.4219 MMVSETQAQAPLPVIDFADENMKPGTDTWVSCCKVVRSAFEDHGGFLALYDKVDPLLYDSVFSSMEQLFDLPLETKMQPTTDKPIYSYAGQRPDIPLYESMAIDNPLSAKDCHKYTTIMWPQGNHSFSESVSSYTKKVAELDYIVKRMVFESYGLDNQKCESLIESTDYVLRCYKYRTPKVGETNAGVHPHTDSGFLTILNQRLNGLEIQLKDGEWFQVDASPSMFAVLAGDAFMVWSNDRIRGCMHRVFMNSNVDRYSLGLLSYAGKVMEPQEELVDEEHPLRYKPFDHYGYLRFFLTEEAVKSASRIKAYCGV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1263 315 Pfam 2OG-Fe(II) oxygenase superfamily 181 260 IPR044861 -
Apr4g1263 315 SUPERFAMILY Clavaminate synthase-like 9 300 - -
Apr4g1263 315 Gene3D - 11 313 IPR027443 -
Apr4g1263 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 271 IPR005123 -
Apr4g1263 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 85 IPR026992 -
Apr4g1263 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 314 - -
Apr4g1263 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 5 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1263 Apr-Chr4 11486208 11487940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1263 134 286 Glycosyltransferase AT5G59530 28.125 4.35e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1263 - - gmx:100817683 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1263 4 11486208 11487940 Apr8g0871 8 9207262 9209358 PCT