Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0838 ATGTCCAGCTCAACAAAAAATGTGGATCCTGCATTCCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCACTGCCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCATACATCATCTTGCAGACAACTCAAGGCAAAGGAGGCTCATATTTTTATGATTTACACTTCTGGATTGGGAAGGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCTGCTCTTGGAGGGCGTGCAGTGCAGCACAGAGAAATCCAAGGACATGAATCTGACAAGTTTTTATCATATTTTAAACCATGTATAATACCACTAGAGGGGGGTGTTGCATCTGGGTTTAAAACACCTGAAGAAGAGCAGTTTGAAACCCGTTTATATGTATGCAGAGGGAAAAGAGTTGTAAGATTGAAACAGGTCCCCTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATACTAGACTCTCAGAATAAGATTTATCAATTTAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAAGCTTTGGAAGTTATACAGTTTCTTAAAGAAAAATATCATGAAGGGACATGTGATGTTGCAATTGTTGATGATGGCAAGTTAGACACTGAATCAGACTCGGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGAAAGAAAGTAATCAGTGAGGATGATATCATTCCGGAGACAACTCCTGCTCAGCTTTATAGTATCACTGATGGTGAGGTCAAGGCTGTGGAAGGTGAACTTTCTAAATCACTGTTGGAAAACAACAAATGCTATTTGCTGGACTGCGGTGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCTTGCCAAGCAGCTGAGGAGTTTCTTGCAAGCCAAAGTAGGCCAAAGTCTACAAGGATAACCAGGATTATTCAAGGTTACGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACTGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCATTGCTTAAGCAACAAGGTATGGGCGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCCTTACTTGAAGGAGGTGGAAAGATAGAGGTATGGCAAATCAACGGAAGTGCTAAGACTCCATTGCCAAAGGAGAATATTGGTAAATTTTATAGTGGAGATTGTTACATTGTACTGTACACATATCACTCTGGTGAGAGGAAAGAAGACTACTACTTGTGCTGTTGGTTTGGCAAAGACAGTATTGAGGAGGACCAAACCATGGCTACTCGGTTGGCCAATACAATGTTCACTTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCTATGGTGGTCCTTAAGGGAGGTTTGAGCTCTGGATACAAAAATTTAGTAGCAGACAAAGGCTTATCAGATGAGACATACACAGCAGAGTGTATTGCACTTATTCGAATTTCTGGAACTTCCATTCATAACAATAAGGCAGTACAAGTTGATGCTGTGCCATCATCATTGAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCCACAATTTTCACTTGGCATGGAAATCAGTGCTCCTTTGAGCAGCAGCAGCTAGCAGCAAAGGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCACTAGGTGGAAAACAAAGTTATACCAGCAAGAAAGTTACTAATGATGTTGTCAGGGACCCGCATTTGTTCACTTTCTCATTTAATAAGGGAAAGTTACATGTGGAGGAGGTTTACAACTTCTCTCAAGATGATTTATTGACGGAGGATATCCTCATACTTGACACACATGCAGAAGTGTTTATTTGGATTGGTCAGTGTGTGGATGCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACGTAGACATGGCTGCATCTCTGGAGGGACTATCTCCACAGGTACCACTATATAAAGTAACAGAAGGGAACGAACCATGTTTTTTCACAACATACTTTTCATGGGATCATGCAAAGTCTACGGTTCAGGGGAACTCATTCCAGAAAAAGGTGTCATTACTCTTTGGCGTTGGCCATGCTGTGGAGGACAAGTTAAATGGGTCAAGTGTAGCCGGACCAAGACAAAGAGCAGAAGCCTTGGCTGCCCTATCTAATGCTTTTAGTTCATCATCTGAGAAATCATCCAGTATGTCGCAGGATAGATTGAATGGGTTAAACCAAGGAGGACCAAGACAAAGGGCAGAGGCTTTAGCTGCTTTAAACTCTGCATTTAGTTCATCATCCGGGACAAAGAATTTTACTCCTAGGCCATCAGGAAAAAGTCAAGGATCACAAAGAGCAGCAGCAGTGGCCGCTCTTTCATCAGTTCTTACTGCTGAGAAGAAGAAAACTTCACCTGATTCTTCTCCTGTGGCTAGCAGTAGTCCTGGTGCTGAAGGTAGCTTTACTGAAGCTAAAAGTGAGACTGCCTACTCTGAAGGCGATGAAGTTGAAGAAGCCAAGGAAATAGCGGAACTTGCCCCTGAAACTGGTGGGAATGGGGATTTGGAGCCGAAACAAGAAAATGTGGAGGATGGAGATGATATTCAAAGTAGTCCAAAGACGCTCAGTTATGATCAATTAAAGACTAAATCTGGTTTTAATTTGTCTGGAATTGATCTTAACCGAAGAGAGGCCTACCTGTCGGAAGAAGAGTTCGAAACTGTTTTTGGAATGGCGAAAGAAGCATTCTATAAATTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2940 0.4184 MSSSTKNVDPAFQGVGQRVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGSYFYDLHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTPEEEQFETRLYVCRGKRVVRLKQVPFARSSLNHDDVFILDSQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGTCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETTPAQLYSITDGEVKAVEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFLASQSRPKSTRITRIIQGYETHSFKSNFDSWPSGSASTGAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKIEVWQINGSAKTPLPKENIGKFYSGDCYIVLYTYHSGERKEDYYLCCWFGKDSIEEDQTMATRLANTMFTSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKNLVADKGLSDETYTAECIALIRISGTSIHNNKAVQVDAVPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVAEFLRPGVALKHAKEGTESSAFWFALGGKQSYTSKKVTNDVVRDPHLFTFSFNKGKLHVEEVYNFSQDDLLTEDILILDTHAEVFIWIGQCVDAKEKQNAFEIGQKYVDMAASLEGLSPQVPLYKVTEGNEPCFFTTYFSWDHAKSTVQGNSFQKKVSLLFGVGHAVEDKLNGSSVAGPRQRAEALAALSNAFSSSSEKSSSMSQDRLNGLNQGGPRQRAEALAALNSAFSSSSGTKNFTPRPSGKSQGSQRAAAVAALSSVLTAEKKKTSPDSSPVASSSPGAEGSFTEAKSETAYSEGDEVEEAKEIAELAPETGGNGDLEPKQENVEDGDDIQSSPKTLSYDQLKTKSGFNLSGIDLNRREAYLSEEEFETVFGMAKEAFYKLPRWKQDMLKKKFELF* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0838 979 Gene3D Severin 133 245 IPR029006 -
Apr8g0838 979 SMART VILL_6 139 234 IPR007122 GO:0051015
Apr8g0838 979 SMART VILL_6 624 719 IPR007122 GO:0051015
Apr8g0838 979 SMART VILL_6 19 117 IPR007122 GO:0051015
Apr8g0838 979 SMART VILL_6 520 607 IPR007122 GO:0051015
Apr8g0838 979 SMART VILL_6 392 490 IPR007122 GO:0051015
Apr8g0838 979 SMART VILL_6 252 344 IPR007122 GO:0051015
Apr8g0838 979 SMART VHP_1 944 979 IPR003128 GO:0003779|GO:0007010
Apr8g0838 979 Gene3D Severin 523 613 IPR029006 -
Apr8g0838 979 MobiDBLite consensus disorder prediction 809 921 - -
Apr8g0838 979 CDD gelsolin_S4_like 386 487 - -
Apr8g0838 979 ProSiteProfiles Headpiece (HP) domain profile. 914 979 IPR003128 GO:0003779|GO:0007010
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Apr8g0838 979 PANTHER VILLIN-3-LIKE ISOFORM X1 1 979 - -
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Apr8g0838 979 MobiDBLite consensus disorder prediction 774 796 - -
Apr8g0838 979 Gene3D Severin 614 736 IPR029006 -
Apr8g0838 979 Pfam Gelsolin repeat 266 337 IPR007123 -
Apr8g0838 979 Pfam Gelsolin repeat 405 483 IPR007123 -
Apr8g0838 979 Pfam Gelsolin repeat 150 217 IPR007123 -
Apr8g0838 979 Pfam Gelsolin repeat 639 713 IPR007123 -
Apr8g0838 979 Pfam Gelsolin repeat 29 111 IPR007123 -
Apr8g0838 979 Pfam Gelsolin repeat 532 583 IPR007123 -
Apr8g0838 979 Pfam Villin headpiece domain 944 979 IPR003128 GO:0003779|GO:0007010
Apr8g0838 979 MobiDBLite consensus disorder prediction 842 872 - -
Apr8g0838 979 SUPERFAMILY VHP, Villin headpiece domain 917 979 IPR036886 GO:0003779|GO:0007010
Apr8g0838 979 Gene3D Severin 388 522 IPR029006 -
Apr8g0838 979 CDD gelsolin_S3_like 254 343 - -
Apr8g0838 979 Gene3D Villin headpiece domain 903 979 IPR036886 GO:0003779|GO:0007010
Apr8g0838 979 PANTHER VILLIN 1 979 IPR007122 GO:0051015
Apr8g0838 979 MobiDBLite consensus disorder prediction 774 790 - -
Apr8g0838 979 CDD gelsolin_S6_like 622 720 - -
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Apr8g0838 979 Gene3D Severin 6 132 IPR029006 -
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 510 615 - -
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Apr8g0838 979 CDD gelsolin_S1_like 12 124 - -
Apr8g0838 979 CDD gelsolin_S5_like 520 609 - -
Apr8g0838 979 CDD gelsolin_S2_like 138 232 - -
Apr8g0838 979 MobiDBLite consensus disorder prediction 809 835 - -
Apr8g0838 979 Gene3D Severin 246 356 IPR029006 -
Apr8g0838 979 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Apr8g0838 979 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Apr8g0838 979 MobiDBLite consensus disorder prediction 873 889 - -
Apr8g0838 979 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0838 Apr-Chr8 8743374 8757165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0838 - - gmx:100788765 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1218 4 10794394 10806073 Apr8g0838 8 8743374 8757165 PCT