Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1218 ATGTCCAGCGCTACAAAAGTGTTGGATCCAGCATTCCAGGGAGTGGGTCAAAAAGTCGGAACTGAAATATGGAGGATTGAAAATTTTCAGCCAGTTCCATTGCCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCTTATATCATCTTGCAGACAACACAAGGCAAAGGAGGCGCTTATATTTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATCAAAACTGTTGAACTCGATGCATCTCTCGGAGGGCGGGCAGTGCAACACAGGGAAATTCAAGGGCATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATAATACCATTAGAGGGTGGTGTGGCTTCTGGATTTAAAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTATATGTATGCAGAGGAAAACGAGTTGTCAGAATAAAACAGGTTCCTTTTGCACGGTCTTCACTGAATCATGATGACGTATTTATCCTAGACACTCAGAATAAGATTTATCAATTCAACGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTAAAGGAAAAGTATCATGAAGGAACATGCAACGTTGCAATTGTTGATGATGGAAAGCTGGATACTGAATCAGACTCAGGAGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCTATTGGGAAGAAAGTAATTGGTGAGGATGATATCATTCCAGAGACCATTCCTGCTCAACTCTATAGTATTGCTGATGGTGAGGTCAAGCCCGTGGAAGGTGAACTTTCTAAATCACTGCTGGAGAACAACAAGTGCTATTTGTTGGACTCTGGTGCTGAGGTATTTGTCTGGGTTGGCCGCGTAACACAAGTTGAAGAACGAAAAGCAGCATGTAAAGCAGCTGAGGAGTTTATTTCAAGTCAAAAAAGACCTAAATCTACAAGGATAACCAGGGTTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATTAGGATCTGCTACTACAGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTGAAAGGGGTGACAAAAAGTACCCCAGTTAATGAAGAAATTCCTCCTTTGATTGAAGGAGGTGGCAAGATGGAGGTATGGCAAATCAATGGAAGTGCTAAGACTCCATTATCTAAGGAGGATATTGGTAAATTTTATAGTGGAGATTGTTACATAGTTCTGTACACTTATCACTCTGGTGAGAGGAAGGAAGACTACTACTTGTGCTGCTGGTTTGGCAAAGACAGCGTTGAGGAGGACCAAAGGATGGCTACTCGATTGGCTAATACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCAACCAATGGTGGTCCTCAAGTTGACTTATGTCTTATGTCTGTTTCAGGGAGGTTTGAGCTCTGGTCACAAAAAATCAGTAGCAGATAAAGGTTTGCCAGATGAGACATACACAGCAGAGAGTATTGCACTTTTACGAATTTCTGGAACATCCATTCATAATAATAAAGTAGTGCAAGTTGATGCAGTGGCGACATCATTGAATTCTACTGAGTGTTTCGTCTTGCAATCTGGGTCAGCTGTTTTTACATGGCATGGGAATCAATGTTCCACTGAGCAGCAGCAGCTTGCAGCTAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGTATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCAGTTGGAGGGAAACAAAGCTACACCAGCAAAAAGGTCACCAATGACATTGTCAGAGACCCACATTTATTCACTTTCTCCTTCATTAGAGGGAAGTTACAGGTAGAGGAGATTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATGCTCATACTTGACACGCATGCAGATGTGTTTATTTGGATTGGTCAGTGTGTGGACCAAAAAGAAAAGCAAAATGCTTTTGATATTGCCCAGAAATACATAGATAAAGCTGCATCTCTGGAGGGACTATCTCCACATGTACCACTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCACGCAAAAGCCATGGTTCAAGGGAACTCATTCCAGAAAAAAGTGACATTACTCTTTGGGATTGGCCATTCTGTAGAGGAAAAGTCTAATGGATCAAGTCAAGGGGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCCTTAAATAATGCATTCAATTCATCTCCAGAGGCAACATCCCCTGTGGATAAGTTGAATGGATTAAATCAAGGAGGACCAAGGCAAAGGGCTGAAGCCTTAGCTGCCTTAAACTCAGCATTCAATTCATCATCTGGAAATAAAATTTATACTCCTAGGCCATCTGGAAGAAATCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCTTCAGTTCTTACCGCTGAAAAGAAGAAACCTTCACCTGAAAGTTCTCCGGTGGCAAGCAGTAGTCCTGTTGTGGAAACTAGCAACTTTGATGCTAAAAGTGAAAGTACCCCTTCTGAAACAGAAGGTCTTGAAGAAGTTGCAGGAGTCAAGGAGACTGAGGAACTTGTCCCTGGAACTGGTACCAATGGGGATTCAGAACCAAAACAAGAAAATGTGGAGGTCGGAAATGACAGTGAAAATAGTGAAAATTTCTTCAGTTATGAGCAATTAAAGACCAAATCTGGTAGTCTTGTGTCTGGAATTGATCTTAAACGGAGAGAGACCTATCTGTCAGACAAAGAGTTTGAAACTGTATTTGGAATGACAAAAGAAGCATTCACAAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGGAAAGTGGATTTGTTCTAG 2970 0.4121 MSSATKVLDPAFQGVGQKVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGAYIYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVCRGKRVVRIKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGTCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIIPETIPAQLYSIADGEVKPVEGELSKSLLENNKCYLLDSGAEVFVWVGRVTQVEERKAACKAAEEFISSQKRPKSTRITRVIQGYETHSFKSNFDSWPLGSATTGAEEGRGKVAALLKQQGMGVKGVTKSTPVNEEIPPLIEGGGKMEVWQINGSAKTPLSKEDIGKFYSGDCYIVLYTYHSGERKEDYYLCCWFGKDSVEEDQRMATRLANTMFNSLKGRPVQGRIFEGKEPPQFIALFQPMVVLKLTYVLCLFQGGLSSGHKKSVADKGLPDETYTAESIALLRISGTSIHNNKVVQVDAVATSLNSTECFVLQSGSAVFTWHGNQCSTEQQQLAAKVAEFLRPGVALKYAKEGTESSAFWFAVGGKQSYTSKKVTNDIVRDPHLFTFSFIRGKLQVEEIYNFSQDDLLTEDMLILDTHADVFIWIGQCVDQKEKQNAFDIAQKYIDKAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKAMVQGNSFQKKVTLLFGIGHSVEEKSNGSSQGGPRQRAEALAALNNAFNSSPEATSPVDKLNGLNQGGPRQRAEALAALNSAFNSSSGNKIYTPRPSGRNQGSQRAAAVAALSSVLTAEKKKPSPESSPVASSSPVVETSNFDAKSESTPSETEGLEEVAGVKETEELVPGTGTNGDSEPKQENVEVGNDSENSENFFSYEQLKTKSGSLVSGIDLKRRETYLSDKEFETVFGMTKEAFTKLPRWKQDMLKRKVDLF* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 605 727 - -
Apr4g1218 989 CDD gelsolin_S5_like 528 618 - -
Apr4g1218 989 MobiDBLite consensus disorder prediction 816 842 - -
Apr4g1218 989 Gene3D Villin headpiece domain 911 989 IPR036886 GO:0003779|GO:0007010
Apr4g1218 989 Gene3D Severin 531 622 IPR029006 -
Apr4g1218 989 SMART VHP_1 954 989 IPR003128 GO:0003779|GO:0007010
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 519 624 - -
Apr4g1218 989 CDD gelsolin_S2_like 139 232 - -
Apr4g1218 989 MobiDBLite consensus disorder prediction 858 881 - -
Apr4g1218 989 MobiDBLite consensus disorder prediction 781 803 - -
Apr4g1218 989 PANTHER VILLIN-3-LIKE ISOFORM X1 1 989 - -
Apr4g1218 989 Gene3D Severin 623 744 IPR029006 -
Apr4g1218 989 Gene3D Severin 253 353 IPR029006 -
Apr4g1218 989 Pfam Villin headpiece domain 954 989 IPR003128 GO:0003779|GO:0007010
Apr4g1218 989 CDD gelsolin_S4_like 386 487 - -
Apr4g1218 989 CDD gelsolin_S6_like 631 729 - -
Apr4g1218 989 SMART VILL_6 19 117 IPR007122 GO:0051015
Apr4g1218 989 SMART VILL_6 251 344 IPR007122 GO:0051015
Apr4g1218 989 SMART VILL_6 139 234 IPR007122 GO:0051015
Apr4g1218 989 SMART VILL_6 527 616 IPR007122 GO:0051015
Apr4g1218 989 SMART VILL_6 392 490 IPR007122 GO:0051015
Apr4g1218 989 SMART VILL_6 633 728 IPR007122 GO:0051015
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Apr4g1218 989 MobiDBLite consensus disorder prediction 816 928 - -
Apr4g1218 989 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 602 621 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 654 676 IPR007122 GO:0051015
Apr4g1218 989 PRINTS Gelsolin family signature 683 702 IPR007122 GO:0051015
Apr4g1218 989 Gene3D Severin 133 245 IPR029006 -
Apr4g1218 989 Pfam Gelsolin repeat 648 722 IPR007123 -
Apr4g1218 989 Pfam Gelsolin repeat 409 484 IPR007123 -
Apr4g1218 989 Pfam Gelsolin repeat 264 337 IPR007123 -
Apr4g1218 989 Pfam Gelsolin repeat 541 592 IPR007123 -
Apr4g1218 989 Pfam Gelsolin repeat 150 217 IPR007123 -
Apr4g1218 989 Pfam Gelsolin repeat 29 111 IPR007123 -
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Apr4g1218 989 CDD gelsolin_S3_like 254 343 - -
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Apr4g1218 989 CDD gelsolin_S1_like 12 124 - -
Apr4g1218 989 Gene3D Severin 5 132 IPR029006 -
Apr4g1218 989 ProSiteProfiles Headpiece (HP) domain profile. 924 989 IPR003128 GO:0003779|GO:0007010
Apr4g1218 989 PANTHER VILLIN 1 989 IPR007122 GO:0051015
Apr4g1218 989 Gene3D Severin 388 530 IPR029006 -
Apr4g1218 989 SUPERFAMILY Actin depolymerizing proteins 383 537 - -
Apr4g1218 989 SUPERFAMILY VHP, Villin headpiece domain 924 989 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1218 Apr-Chr4 10794394 10806073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1218 - - gmx:100787208 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1218 4 10794394 10806073 Apr8g0838 8 8743374 8757165 PCT