Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0826 ATGACGGTGACACCTAAGATCTCGGTTAACGATGGGAACCTGGTAGTTCATGGCAAGACCATACTAACTGGAGTGCCAAACAACATTGTGCTAACTCCAGGAACCGGAAAGGGTCTTGTGACCGGTGCTTTTATTGGTGCCACTGCTTCCAACAGCAAAAGCCTCCATGTCTTTCCAATGGGTGTCTTAGAGGATGTTCGGTTCTTGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCACAGAGTGGGAACTTGTGGGAGGGATGTTCCATTGGAGACTCAATTCATGCTTATAGAGAGCAAAGAGAGTAAAGATAACCAGGAGAATTCTGCAACAATCTACACTGTCATGCTTCCTCTCCTGGAAGGCCAGTTCCGTGCTGTTCTACAAGGCAATGACAAAAACGAAATCGAGATTTGCCTTGAGAGTGGAGATCCAGCTGTTGAGACCAATCAAGGCCTTCACCTGGTCTACATGCATGCTGGTACCAACCCCTATGAAGTCATCAACCAGGCTGTCAAGGCTGTAGAAAACTATATGCAAACTTTCCTTCGTCGTGAGAAGAAAAAATTGCCATCTTTTATTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCAGAGGGTGTTAAAGAAGGCCTTAGAAGCCTGTCAGAGGGGGGCACATCCCCTCGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAGTAAACCAAAGGATGAAGATTGTGTTGTACAAGAAGGAGCACAGTTTGCTACAAGATTGACTGGTATTAAGGAGAACGCTAAATTTCAAAAGAATGAACAGAGCAATGGTACAATCTCAGGCCTGAAACATGTTGTAGATGAAGCAAAGCAACATCACAATGTGAAATATGTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTAAAGCCAGCAGCAAGTGGCATGGAGCATTATGACACTGCCTTAGCATACCCAGTGCAGTCTCCAGGTGTCCTTGGAAACCAACCAGACCTTGTCATGGATAGCTTGTCGGTACATGGATTGGGTCTGGTGCACCCGAAAAAGGTTTTTGATTTCTACAATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAGGTTGATGTGCAAAACATTATTGAGACCCTTGGTAGTGGTCATGGTGGTAGAGTCTCACTTACTCGCAGCTATCATCAGGCGCTTGAGGCGTCTGTTGCTCGTAATTTTCCTGACAATGGATGCATTGCTTGCATGTGTCATAACACTGATGGCCTTTATAGTGCCAAGCAAACTGCTGTTGTGAGAGCTTCTGATGACTTTTATCCACATGATCCTGCTTCCCACACCATCCATATTTCATCCGTTGCATATAACACACTTTTCCTTGGAGAATTCATGCAACCTGACTGGGATATGTTCCATAGTTTACATCCAGCTGCAGAGTATCATGCTGCAGCTCGTGCAGTCAGTGGAGGTCCAATTTATGTTAGTGATAAGCCAGGAAGGCACAATTTTGATCTTCTTAAAAAACTGGTTCTGCCTGATGGTTCAATTCTCCGTGCCCAGTTGCCTGGCCGGCCTACTGTTGACTCTCTCTTTCTTGATCCAGCAAGAGATGGAACTAGCTTGCTCAAGATATGGAACTTGAACAAATTTTCTGGAGTGGTTGGGGTGTTTAATTGCCAAGGTGCTGGATGGTGCAAGATAGAGAAGAAAACCCGAATTCATTGTGCATCTCCTGGGACACTTACTGGCTCTGTTTGTGCCTCTGATGTTGATTTCATTGCTCAAGTGGCAGGTGCTGACTGGCATGGCGACACTATTGTTTATGCCTACAGATCAGGTGAGGTAATTCGGCTACCAAAAGGTGCTTCGTTGCCAGTGACACTTAATGTTTTAGAGTATGAGCTTTTCCATTTTTGTCCAATCAAGGAAATTGCACCAAGTATTTCATTTGCACCAATAGGTCTACTGGATATGTTAAACACTGGAGGTGCTGTGGAACAGTTTGAAATCCATGAAGAATCTGTAGCGCCTAATGGAGAGAAATCAGCAAAAGCAACTATTACTCTCAGAGTCAGGGGAAGTGGCAGATTTGGGGTCTATTCTTCCCAGCGCCCACTTAAGTGTGTGGTTGGTGACAATGAAACTGACTTCAACTATGTCTCAGATATTGGGTTGATAACCTTCTCAATCCCAGTACCAATAGAGGAGATGTACAAATGGTTGATAGAGATTCAATTTTGA 2274 0.4459 MTVTPKISVNDGNLVVHGKTILTGVPNNIVLTPGTGKGLVTGAFIGATASNSKSLHVFPMGVLEDVRFLCCFRFKLWWMTHRVGTCGRDVPLETQFMLIESKESKDNQENSATIYTVMLPLLEGQFRAVLQGNDKNEIEICLESGDPAVETNQGLHLVYMHAGTNPYEVINQAVKAVENYMQTFLRREKKKLPSFIDWFGWCTWDAFYTDVTAEGVKEGLRSLSEGGTSPRFLIIDDGWQQIESKPKDEDCVVQEGAQFATRLTGIKENAKFQKNEQSNGTISGLKHVVDEAKQHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDLVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVSGGPIYVSDKPGRHNFDLLKKLVLPDGSILRAQLPGRPTVDSLFLDPARDGTSLLKIWNLNKFSGVVGVFNCQGAGWCKIEKKTRIHCASPGTLTGSVCASDVDFIAQVAGADWHGDTIVYAYRSGEVIRLPKGASLPVTLNVLEYELFHFCPIKEIAPSISFAPIGLLDMLNTGGAVEQFEIHEESVAPNGEKSAKATITLRVRGSGRFGVYSSQRPLKCVVGDNETDFNYVSDIGLITFSIPVPIEEMYKWLIEIQF* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0826 757 Pfam Raffinose synthase or seed imbibition protein Sip1 7 740 IPR008811 -
Apr8g0826 757 SUPERFAMILY (Trans)glycosidases 195 520 IPR017853 -
Apr8g0826 757 Gene3D Aldolase class I 198 520 IPR013785 -
Apr8g0826 757 PANTHER - 1 756 IPR008811 -
Apr8g0826 757 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0826 Apr-Chr8 8613371 8619646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0826 1 556 Glycoside Hydrolase AT3G57520 80.610 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0826 K06617 - gmx:100807861 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0826 8 8613371 8619646 Apr8g0826 8 8613371 8619646 ECH
Apr4g1203 4 10573391 10579523 Apr8g0826 8 8613371 8619646 PCT