Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1203 ATGACGGTCACACCTAAGATCTCCGTTAACGATGGAAAGCTGGTTGTTCATGGCAAGACCATACTTACTGGAGTTCCTGACAACGTTGTGCTGAGTCCAGGATCAGGAAACGGCCTTGTGACTGGTGCTTTCGTTGGTGCCACAGCTTCCCACAGCAAAAGTCTCCACGTATTTCCTATGGGTGCCTTAGAGGGGCTCCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATGTTCCTTTGGAGACCCAATTCATGCTTATAGAGAGCAAAGACAGTGAACTTGATGGGGAGAATTCTCCAACCATCTACACTGTCTTGCTTCCACTCCTAGAAGGTCAATTCCGAGCTGTTCTACAAGGCAATGACAAAAACGAGATAGAGATTTGCCTCGAGAGTGGGGATAATGCTGTTGAGACTAACCAAGGCCTTCACCTAGTCTACATGCATGCTGGGACCAATCCCTTTGAAGTCATCAATCAAGCTGTCAAGGCTGTAGAAAAACACATGCAAACTTTTCTTCATCGTGAGAAGAAAAGATTGCCATCTTTTCTAGACTGGTTTGGTTGGTGCACTTGGGATGCTTTTTATACTGATGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGTCTATCAGAGGGAGGTGCTCCTCCTCGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAACAAATCAAAGGATGCTGATTGTGTTGTACAAGAAGGAGCACAGTTTGCTACTAGGTTAACCGGTATTAAAGAGAATACTAAATTTCAAAAGAAATTACTGAACGACGAAAAGATGTCAGGTCTGAAGCATCTTGTAGATGGAGCAAAGCAACATCACAATGTGAAAAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGTGGTGTTAAGCCAGCAGCAACAGGCATGGAACATTATGACACTGCCTTGGCATACCCAGTGCAGTCACCAGGTGTACTAGGAAACCAACCAGACATTGTCATGGATAGCTTGGCTGTACATGGCCTTGGCCTAGTGCACCCAAAGAAGGTTTTCAATTTCTACAATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTCGGCGCTGGACACGGTGGCAGAGTCTCACTCACACGCAGCTATCATCATGCGCTTGAGGCTTCCATTGCTCGTAACTTTACTGACAATGGATGCATTGCATGTATGTGTCACAACACTGACGGGCTTTATAGTGCTAAACAGACTGCTGTTGTGAGAGCATCTGATGATTTTTACCCTCGTGATCCTGCTTCCCACACCATCCATATTTCATCTGTTGCATACAACTCACTTTTCCTTGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACACCCAGCAGCAGATTATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCAATTTATGTTAGTGACAAGCCGGGCAACCACAATTTTGATCTTCTTAAGAAGCTGGTTCTCCCTGATGGTTCAGTTCTCCGTGCTCAGCTACCGGGCAGGCCCACTCGAGATTCTCTCTTTGCAGATCCAGCAAGAGACGGAACTAGCTTGCTCAAAATATGGAACCTAAACAAATGCGCTGGAGTAGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGAGAGAGAAGAAAACCCGCATCCATGATGCATCTCCTGGTACACTCACTACCTCTGTCTGTGCCTCTGATGTCGACCTCATCAGCCAAGTAGCAGGAGCTAAATGGCTTGGTGAGACCATTGTTTATGGTTACAGATCAGGTGAGGTGATTCGGCTACCAAAAGGGGTTTCAGTTCCTGTGACACTAAAAGTTCTGGAGTATGAACTTTTCCATTTCTGTCCAATCCATGAAATAGCACCGACTATTTCATTTGCAGCAATAGGGCTACTGGATATGTTCAACATTGGAGGAGCTGTGGAGCAGGTTGAAATTCATAGTGCCTCTAACAACAAACCAGAATTATTTGATGGTGAGGTGGTGTCAGAGTTGACCACTTCACTCAGTTCTAACAGAGCAGCAACAGCAACTATTGCTTTGAGAGTCAGGGGAAGTGGGAGGTTTGGGGTGTACTCCTCACAGCACCCACTGAAGTGTGTGATAGATGGCAATGAAACTGACTTCTACTATAACTCGGAGACTGGTTTGACAACCCTCTCCATCCCAGTTCCTCAAGAGGAGATGTATAGATGGTCTATAGAGATCCAAGTTTGA 2322 0.4574 MTVTPKISVNDGKLVVHGKTILTGVPDNVVLSPGSGNGLVTGAFVGATASHSKSLHVFPMGALEGLRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKDSELDGENSPTIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDNAVETNQGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGAPPRFLIIDDGWQQIENKSKDADCVVQEGAQFATRLTGIKENTKFQKKLLNDEKMSGLKHLVDGAKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFTDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAADYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLPDGSVLRAQLPGRPTRDSLFADPARDGTSLLKIWNLNKCAGVVGVFNCQGAGWCKREKKTRIHDASPGTLTTSVCASDVDLISQVAGAKWLGETIVYGYRSGEVIRLPKGVSVPVTLKVLEYELFHFCPIHEIAPTISFAAIGLLDMFNIGGAVEQVEIHSASNNKPELFDGEVVSELTTSLSSNRAATATIALRVRGSGRFGVYSSQHPLKCVIDGNETDFYYNSETGLTTLSIPVPQEEMYRWSIEIQV* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1203 773 PANTHER - 1 773 IPR008811 -
Apr4g1203 773 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 773 - -
Apr4g1203 773 Pfam Raffinose synthase or seed imbibition protein Sip1 7 756 IPR008811 -
Apr4g1203 773 Gene3D Aldolase class I 197 520 IPR013785 -
Apr4g1203 773 SUPERFAMILY (Trans)glycosidases 195 525 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1203 Apr-Chr4 10573391 10579523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1203 1 556 Glycoside Hydrolase AT3G57520 83.303 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1203 K06617 - gmx:100807861 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1203 4 10573391 10579523 Apr4g1203 4 10573391 10579523 ECH
Apr4g1203 4 10573391 10579523 Apr8g0826 8 8613371 8619646 PCT