Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0818 ATGGGAGAAGCTCCAACATTCATTCTTCAAGACCTGCAGAATGGGACTACCAATGGCTTTCAATCTAAAAAGGGAACTTTTGAAACAGCTACAATCATTGGTGATAAAAGGTATGTCATTGGGGGAACTGATGGTAAAACTTTATCAATAAAAGTTCAAATTCTAAACAACTGTCTTGGGGAATGGATTGATCCCTTTGTGCTAGGCACCAAACCCATTTCAAGTAATGGCCACTCGGCCGTATTTTTGAAAGACCGAGTGCTAATTCTTAAGAAAAATGCTAAGCCAGATGATTGTATATGGTTTCTGGAGGTAGACACACAATATGTCAGGCAGCAAAGAAAAAATTTGGGGACTGAGGTTGTTGCATGGAGTAAGGGTGTGGTAGGGCATGCTGAGAAACCTATTATTGTTAGTGGTCCATCTGGAGTAGGTAAAGGAACATTAATATCAATGCTCATGAAGGAATTCCCATCTATGTTTGGTTTCTCTGTGAGCCACACAACCCGTGCACCAAGAGGTACCGAGAAAGATGGTGTCCATTACCATTTTACTGAAAAGAGTGTTATGGAGAAAGATATCGAAGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGGTAATCTATATGGGACCAGTGTTGAGGCTGTTGAAATGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAAATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGCCCCCCGTCAATGGAAGAGCTAGAGAAGCGTCTTCGTGATCGAGGGACGGAAACAGAAGAACAAATCTTGAAGCGATTGCGAAATGCTCGGGACGAGATTGAGCAAGGAAAGTCATCAGGCATATTTGATACCATCTTACACAATGACAAACTTGAGGAGTGTTATGAGAATCTGAAGAAATTACTAGGACTTGATGGTTGTGTCACTCCTTCACCTAATTCAGCAGCAGGAGAGATCAATCTTCCAATTTACCATGCAGTGTCAACAATTGATGACAAAATCGTCATAAACTCTTCAGGACTACAAAAGGAATCAAATAACCGGATCATGTTAGATGTGTCGTCACTTAAAGGGGGTGCACCTGGACGAACAAGAGGACTTGATTTTCAAGTCATCGACTCTTTTTCAGATGGCAATGGGAATGGACCAATTTGA 1191 0.4123 MGEAPTFILQDLQNGTTNGFQSKKGTFETATIIGDKRYVIGGTDGKTLSIKVQILNNCLGEWIDPFVLGTKPISSNGHSAVFLKDRVLILKKNAKPDDCIWFLEVDTQYVRQQRKNLGTEVVAWSKGVVGHAEKPIIVSGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGTEKDGVHYHFTEKSVMEKDIEDGKFLEFASVHGNLYGTSVEAVEMVSDAGKRCILDIDVQGAKSVRASSLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNARDEIEQGKSSGIFDTILHNDKLEECYENLKKLLGLDGCVTPSPNSAAGEINLPIYHAVSTIDDKIVINSSGLQKESNNRIMLDVSSLKGGAPGRTRGLDFQVIDSFSDGNGNGPI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0818 396 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 331 - -
Apr8g0818 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Apr8g0818 396 SMART gk_7 132 318 IPR008145 -
Apr8g0818 396 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Apr8g0818 396 CDD GMPK 135 254 - -
Apr8g0818 396 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Apr8g0818 396 SUPERFAMILY Galactose oxidase, central domain 19 113 IPR011043 -
Apr8g0818 396 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Apr8g0818 396 Gene3D - 129 316 IPR027417 -
Apr8g0818 396 Pfam Guanylate kinase 133 314 IPR008145 -
Apr8g0818 396 PANTHER GUANYLATE KINASE-RELATED 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0818 Apr-Chr8 8497699 8501125 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0818 K00942 - gmx:100809808 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0818 8 8497699 8501125 Apr8g0818 8 8497699 8501125 ECH
Apr4g1200 4 10510032 10513784 Apr8g0818 8 8497699 8501125 PCT