Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1200 ATGGGAGAAGCACCAGCATTGCTTGTTGATGACATGCAGGATGGGCCTCTTAATGGCCTTGAATTGAAAAACGGAGCTTGCAAAACAACTGCTACAGTTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCCTTATCTTGGAGAATGGGTTCATCCCACTGTGCATGGCACGAAACCCATGTTATGCAAAGGCCTCTCAGCAGTGCCTTTGGAAGATCGAATCCTGATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGACACCCAATATGTTAGGCAGCAGCAAAAAAATTTGAGGACCGAGGTTGTTGCATGGAGTAAAGGTGTGATAGGCAATGCTGAGAAGCCTATTGTTATTAGTGGTCCTTCTGGAGTGGGTAAAGGAACACTGATAGCAATGCTGATGAAGGAATTTCCATCCATGTTTGGCTTCTCTGTGAGTCACACCACTCGTGCTCCAAGAGGTATGGAGAAAGATGGGGTCCATTACCATTTTACTGAGAAAAGTATAATGGAGAAAGAGATTAAAGCTGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGTAATCTGTACGGGACCAGTGTTGAGGCTGTCGAATTGGTAGCAGATGCAGGCAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGTCCCCCATCAATGGAAGAGCTGGAGAAGCGCCTTCGTGACCGAGGGACAGAAAATGAGGAACAGATCCTAAAGCGACTACGTAATGCTGAGGCTGAGATTGAACAAGGGAAATCTTCTTGCATATTTGATTTCATCTTATACAATGACAAACTTGAGGAGTGTTATGAGAGACTTAAGAAATTGTTGGGACTAGATGGTTTTGTCAGTGCTCCACCTAAATCGGGCCCTAGAGAGATTAATATACCAATGGACCATTCAGTGTCAAAAATTGATAACAAAATCATTATAAACTGCAATGGCTCAGGAGAGAAGGAATCAAAGAATTTGATTATGTTGGATGTTTCCTCACTAAAAGGGGGCGCGCCAGGACGGACAAGAGGGCTAAATTTTCAAGCCATTGGCTCGTTTTCGAATGTCTTGAATGGGATAGACCATCTTAGCTAA 1200 0.4283 MGEAPALLVDDMQDGPLNGLELKNGACKTTATVGDKTYVIGGADDGTLSIEVQIFDPYLGEWVHPTVHGTKPMLCKGLSAVPLEDRILILKKGSKPDDQIWFLEVDTQYVRQQQKNLRTEVVAWSKGVIGNAEKPIVISGPSGVGKGTLIAMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSIMEKEIKAGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRDRGTENEEQILKRLRNAEAEIEQGKSSCIFDFILYNDKLEECYERLKKLLGLDGFVSAPPKSGPREINIPMDHSVSKIDNKIIINCNGSGEKESKNLIMLDVSSLKGGAPGRTRGLNFQAIGSFSNVLNGIDHLS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1200 399 SMART gk_7 132 318 IPR008145 -
Apr4g1200 399 Pfam Guanylate kinase 133 314 IPR008145 -
Apr4g1200 399 PANTHER GUANYLATE KINASE-RELATED 1 331 - -
Apr4g1200 399 Gene3D - 21 125 IPR015915 GO:0005515
Apr4g1200 399 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Apr4g1200 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Apr4g1200 399 SUPERFAMILY Kelch motif 29 111 IPR015915 GO:0005515
Apr4g1200 399 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Apr4g1200 399 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Apr4g1200 399 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 331 - -
Apr4g1200 399 Coils Coil 264 291 - -
Apr4g1200 399 Gene3D - 129 317 IPR027417 -
Apr4g1200 399 CDD GMPK 135 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1200 Apr-Chr4 10510032 10513784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1200 K00942 - gmx:100808931 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1200 4 10510032 10513784 Apr4g1200 4 10510032 10513784 ECH
Apr4g1200 4 10510032 10513784 Apr8g0818 8 8497699 8501125 PCT