Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0807 ATGGCTGTTGCACCTGCAGCTGTTATCGTCCCATTGGGCCTTCTCTTCTTCGCTTCCGGTCTCATCGTTAACCTCTTTCAGGCAATATGCTATGTGGTTGTTCGGCCAGTGTCGAAGAATTTGTACCGAAGGATGAACAGGGTGATGGCAGAACTGCTATGGTTGGAACTCGTGTGGATTATTGATTGGTGGGCGGGTGTTAAGATCCAAGTATTCACAGATCGTGAAACCTTTCGTTTGATGGGTAAAGAGCATGCTCTTGTCATATCAAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTAGGCAGCACCCTTGCTGTGATGAAGAAATCTTCGAAGTTTCTACCGGTTATTGGTTGGTCAATGTGGTTTTCTGAGTATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAAGTCAGGTCTACAGCAACTGATGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTCGTAGAAGGAACTCGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAGTATGCAACCTCAGCTGGATTGCCTGTTCCCAGAAACGTTTTGATTCCAAGAACGAAGGGATTTGTTTCAGCAGTAAGCCATATGCGCTCATTTGTTCCCGCCATTTATGATGTAACAGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGGGGGCAACCTTCAGTGGTGCATGTGCATATTAAGCGGCATTTGATGAAGGATTTGCCAGAAGCAGATGAAGCTGTTGCTCAATGGTGTCGAGATATATTTGTCGCTAAGGACGCATTGTTAGACAAACATATAGCTGAGGACAAATTCGGTGATCAAGAACTGCAGGACACTGGTCGACCAATAAAGTCTCTTGTGGTTGTCATATCTTGGGCTTGTGTGGTTGTTACGGGGGCTGTAAAGTTCCTTCTATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGTAGTCGTAACTCTCCTCATGCACATCATGATTAAGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGATTGCCCCTTCGCAGTCCAAGAATAGGGGACAGGTGGGAGGTAGTGATAACAAACAAGACTAG 1161 0.4574 MAVAPAAVIVPLGLLFFASGLIVNLFQAICYVVVRPVSKNLYRRMNRVMAELLWLELVWIIDWWAGVKIQVFTDRETFRLMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQQLMDFPLPFWLALFVEGTRFTQAKLLAAQEYATSAGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGQPSVVHVHIKRHLMKDLPEADEAVAQWCRDIFVAKDALLDKHIAEDKFGDQELQDTGRPIKSLVVVISWACVVVTGAVKFLLWSSLLSSWKGVAFSAFGLVVVTLLMHIMIKFSQSERSTPSKIAPSQSKNRGQVGGSDNKQD* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0807 386 CDD LPLAT_LCLAT1-like 58 253 - -
Apr8g0807 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Apr8g0807 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Apr8g0807 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Apr8g0807 386 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Apr8g0807 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 63 290 - -
Apr8g0807 386 MobiDBLite consensus disorder prediction 361 386 - -
Apr8g0807 386 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0807 Apr-Chr8 8286551 8296809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0807 3 385 Miscellaneous Gene Families AT3G57650 76.240 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0807 K13523 - gmx:100814107 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0807 8 8286551 8296809 Apr8g0807 8 8286551 8296809 ECH
Apr4g1190 4 10393834 10401877 Apr8g0807 8 8286551 8296809 PCT