Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1190 ATGGCTATTGCAGCAGCAGCTGTCGTGGTCCCATTGGGCCTGCTCTTCTTCGCCTCTGGCCTCGTCGTTAATCTCATTCAGGCAATATGCTATGTTCTTGTAAGGCCACTGTCAAAGAATTTGTACAGACGGATCAACCGGGTAGTAGCGGAACTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCAGGAGTGAAGGTCCAAGTATTCACCGATCATGAAACCTTTCGTTTGATGGGTAAAGAGCATGCACTTGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTATCTCAGCGTTCAGGTTGCCTTGGCAGCACTTTAGCTGTGATGAAGAAATCATCCAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAATTTGGGCCAAAGATGAAATCACTTTAAAGTCAGGCCTTAAACGGCTGAGTGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTCGTAGAAGGAACACGCTTTACACAGGCCAAACTACTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCTAGAACTAAGGGGTTTGTTTCTGCAGTAAGTCATATGCGTTCATTTGTTCCAGCCATTTATGATGTAACAGTGGCTATCCCCAAGAGTTCCCCTGCTCCTACAATGCTAAGACTCTTCAAGGGGCAGCCTTCAGTGGTTCAAGTTCATATCAAGCGGCATTTAATGAAGGAATTGCCAGAAACAGATGACGCTGTCGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTTTGTTAGACAAGCATATAGCTGAGGATACTTTCAGTGATCAAGAGCTGCAGGATACTGGGAGACCAATAAAATCTCTTCTGGTAGTTATATCTTGGGCATGCCTGGTTGTTACGGGGTCTGTAAAGTTCCTACAACGGTCGGCGCTGCTGTCTTCCTGGAAGGGTGTTGCATTTTCTGCTTTTGGTTTGGCAGTTGTTACTGCACTCATGCACATCTTGATTCAATTCTCACAGTCAGAGCGTTCAAACCCAGCCAAGATCGCCCCTGCAAAACCTAAGAACAAAGCGCAGCAGCCAGTGGCTAGAAATGACAAAGAACAGTAG 1164 0.4562 MAIAAAAVVVPLGLLFFASGLVVNLIQAICYVLVRPLSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQVFTDHETFRLMGKEHALVISNHRSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERIWAKDEITLKSGLKRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFKGQPSVVQVHIKRHLMKELPETDDAVAQWCRDIFVAKDALLDKHIAEDTFSDQELQDTGRPIKSLLVVISWACLVVTGSVKFLQRSALLSSWKGVAFSAFGLAVVTALMHILIQFSQSERSNPAKIAPAKPKNKAQQPVARNDKEQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1190 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Apr4g1190 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Apr4g1190 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Apr4g1190 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 50 287 - -
Apr4g1190 387 MobiDBLite consensus disorder prediction 363 387 - -
Apr4g1190 387 CDD LPLAT_LCLAT1-like 62 253 - -
Apr4g1190 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Apr4g1190 387 SMART plsc_2 86 208 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1190 Apr-Chr4 10393834 10401877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1190 3 386 Miscellaneous Gene Families AT3G57650 76.302 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1190 K13523 - gmx:100792858 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1190 4 10393834 10401877 Apr4g1190 4 10393834 10401877 ECH
Apr4g1190 4 10393834 10401877 Apr8g0807 8 8286551 8296809 PCT