Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0752 ATGGATTCTTCTTCCCACTCTCCCGCATCATCACTTCATTCTTATGGATATGTTCAAAACATTATGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCCTGAAATACCTGAAGGAGAAGAAAGGTTGAGAGCTGTATGTACAAGTTGTGGGAAGATTTCCTATCAGAATCCAAAAATGGTAGTTGGTTGCCTCATTGAGCATGATAGCAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCGTCTTATGGCCTATGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCTGCTATGGAAGGTGCTATCAGGGAAACAAGGGAGGAAGCCAATGCTGATGTGGAAGTGATTTCACCCTTTGCTCAATTGGATATTCCTTTGATTGGCCAAACTTATATAATCTTCTTGGCAAGGCTGAAGAAGCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTTTCACTCAATGAAATACCCTTCAGTTCTCTATCTTTCTCGTCGATGGTGGTTACTTTAAGTTTGTATGTTGAGGATGTGAAGGCAGGAGGAAAGCCCAAATTCCATTACGGTACCATCAACAAAAGGCCTGGTACTAGTCCTTCTGATATTCATGCCTTTACACTGGATCATCATATGCAATCATGA 654 0.4266 MDSSSHSPASSLHSYGYVQNIMFCQWCGGPTKPEIPEGEERLRAVCTSCGKISYQNPKMVVGCLIEHDSKVLLCKRKIEPSYGLWTLPAGYLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYIIFLARLKKPHFSPGPESSECQLFSLNEIPFSSLSFSSMVVTLSLYVEDVKAGGKPKFHYGTINKRPGTSPSDIHAFTLDHHMQS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0752 217 Pfam NUDIX domain 60 161 IPR000086 -
Apr8g0752 217 ProSitePatterns Nudix box signature. 90 111 IPR020084 GO:0016787
Apr8g0752 217 ProSiteProfiles Nudix hydrolase domain profile. 56 179 IPR000086 -
Apr8g0752 217 SUPERFAMILY Nudix 23 183 IPR015797 -
Apr8g0752 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 56 208 - -
Apr8g0752 217 Pfam Nudix N-terminal 23 55 IPR029401 -
Apr8g0752 217 PANTHER NUDIX HYDROLASE 23 10 216 - -
Apr8g0752 217 PANTHER BNAA03G19740D PROTEIN 10 216 - -
Apr8g0752 217 Gene3D - 20 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0752 Apr-Chr8 7439690 7444029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0752 K18453 - gmx:100777180 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0752 8 7439690 7444029 Apr8g0752 8 7439690 7444029 ECH
Apr4g1141 4 9741247 9745027 Apr8g0752 8 7439690 7444029 PCT