Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1141 ATGGTGAAAGCTATCCAACTTCAGATATATGGATTAGTTAGTCAGCGATGGAATTTCAAACCTCGCACATCCATTTCACTCTCCTCATTCTCCTCAATATCATACCCTAACCCTTTTTCCAAACTGCTTCCCACCAATACCCTCTCTCGCAGGGTTCGATTCGCACCGTTTCATGCTTCCTCATCACCGCTGCATTCTGCTGGGAACGTTCGCAACATCAAGTTCTGTCAGTGGTGTGGTGGTTCAACCAAGCATGATATTCCCCATGGAGAAGAAAAGTTGAGAGCTATATGTACTGTTTGTGGGAAGATTGCTTATCAGAATCCGAAAATGGTAGTTGGCTGCCTCATTGAACATGATAACAAGGTCCTTCTTTGCAAGAGGAGTATTCAACCGTCTCATGGCCTTTGGACCCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCAGCTGTGGAAGGTGCCATCAGGGAAACAAGGGAAGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCCCAATTGGATATTCCTTTAATTGGCCAAGCCGGGTACAAGTCCTTCGGATATTCGTGCCTATACATTGGATCATCATATGCACTGTTGAATCGTGATAAGCAGTGGAGTATGAAGATTGTAAGTAAAAGAATTTATCGTCGGCCAGCCAGATCATTGCTTTATCTTCTGCGAGAACTTTCAAGCACTATTGGCTTAAATTCACCGTTGTCACAAGTTAGATTAACAGTGTTGCGATTCGAGAAGGACATGTTAGATAACCATAATGATCACTGA 792 0.4318 MVKAIQLQIYGLVSQRWNFKPRTSISLSSFSSISYPNPFSKLLPTNTLSRRVRFAPFHASSSPLHSAGNVRNIKFCQWCGGSTKHDIPHGEEKLRAICTVCGKIAYQNPKMVVGCLIEHDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQAGYKSFGYSCLYIGSSYALLNRDKQWSMKIVSKRIYRRPARSLLYLLRELSSTIGLNSPLSQVRLTVLRFEKDMLDNHNDH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1141 263 Pfam Nudix N-terminal 74 107 IPR029401 -
Apr4g1141 263 Gene3D - 71 107 - -
Apr4g1141 263 ProSitePatterns Nudix box signature. 142 163 IPR020084 GO:0016787
Apr4g1141 263 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 108 213 - -
Apr4g1141 263 PANTHER NUDIX HYDROLASE 23 23 183 - -
Apr4g1141 263 SUPERFAMILY Nudix 74 196 IPR015797 -
Apr4g1141 263 Pfam NUDIX domain 112 175 IPR000086 -
Apr4g1141 263 ProSiteProfiles Nudix hydrolase domain profile. 108 263 IPR000086 -
Apr4g1141 263 PANTHER BNAA03G19740D PROTEIN 23 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1141 Apr-Chr4 9741247 9745027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1141 K18453 - gmx:100808417 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1141 4 9741247 9745027 Apr4g1141 4 9741247 9745027 ECH
Apr4g1141 4 9741247 9745027 Apr8g0752 8 7439690 7444029 PCT