Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0739 ATGCTGAGCGTGCTGCGCGTGCACCTTCCCTCTGAAATTCCCATTGTAGGCTGCGAACTAACGCCTTACGTGCTTCTTCGCCGCCCCGATAAGACCGTTTTCACCGATGATGTTCCCGAAACCTCCCCCTTAGATGGACACTTTTTGCGCTATAAGTGGTATCGTGTACAGAGTGATAGAAAAGTTGCCGTCTGTAGCATACATCCATCTGAGCAAGCCACACTGCAGTGCCTAGGTTGTGTTAAGGCCAAAATACCTGTTTCCAAAAGTTACCATTGCACCACAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTGTCTTACATGACCGTGCTGCAAGTGCTCTTAATGAAAATGGAAATGAGGAGGAGGAGGTATTTGGGCGTTTTAATAGTAGTGGGTCTGGGGTAATCAGTTCCAGTTTATCTGCCTCTGCATCAAGTGCTAGCTTGACGAATGGGTCTGCAACACCTTTGTATCCAGCAGCTGTCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGACGGTCCAAGACTTATACCCCTACTGCTGATGACGTTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCTGTGGGCCATGTTAACACTATACTAACTTCACGTGTCATTCCTGCGCCCTCACCTATTCCACGCCGATCGATACCTGTTGAAGGGATGGGGAATTTAGATGTGGATGGGCGAATGACATCTTCAGGAACTTTTACTGTTCTATCATACAATATATTGTCTGAAGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGCTACGAGAAATTGTTGGTTACCGTGCAGACATTATTTGTCTTCAGGAGGTTCAAAATGACCATTATGACGAATTTTTTGCTCCTGAACTGGACAAACATGGCTACTATGGTCTTTACAAGAGAAAAACAAATGAGGTGTACAGTGGAAACATGAATACAATTGATGGTTGTGCAACATTCTTCCGTAGAGATAGATTTTCACATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCGTTGACAGAGGCTACAATTCCAACCACTCAGAAGAAAACGGCCTTGAATAGGCTGGTTAAGGATAATGTTGCACTAATTGTGGTTCTAGAAACAAAAGTTAACAATCAGCCATTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTCCCCCAAGATTTAAAGGATGTGAAACTCTGGCAGGTGCACACTCTCTTAAAAGGATTGGAGAAAATAGCTGCAAGTGCAGACATTCCCATGATTGTTTGTGGAGATTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCGATGGGGAAGGTAGATCCTTTACATCCTGATTTAGCAGTTGACCCGCTTAATATTTTACGCCCTCACAGCAAGTTGGTTCATCAGTTACCACTGGTCAGTGCATACTCATCTTTTGCTAGAACAGTTGGCCTTGGATATGAGCAGCATAAAAGGAGACTGGATGGTGGAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACTGCGGATTCATTGGTTGTGGAGTCTTTATTGGAGTTATTGGATGAGGAGAGTTTGAGAAAGGACACTGCACTTCCTTCACCTGAATGGTCCTCAGATCACATAGCTCTCTTAGCTGCATTTCATTGCTGCAAGAATAAATCTAGGCGTTGA 1803 0.4304 MLSVLRVHLPSEIPIVGCELTPYVLLRRPDKTVFTDDVPETSPLDGHFLRYKWYRVQSDRKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSSGSGVISSSLSASASSASLTNGSATPLYPAAVTQRSGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPIPRRSIPVEGMGNLDVDGRMTSSGTFTVLSYNILSEAYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQNDHYDEFFAPELDKHGYYGLYKRKTNEVYSGNMNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLETKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMIVCGDFNSVPGSAPHALLAMGKVDPLHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEQHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAAFHCCKNKSRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0739 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Apr8g0739 600 Gene3D Endonuclease/exonuclease/phosphatase 223 599 IPR036691 -
Apr8g0739 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 597 - -
Apr8g0739 600 CDD Deadenylase_CCR4 252 593 - -
Apr8g0739 600 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 597 - -
Apr8g0739 600 SUPERFAMILY DNase I-like 245 594 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0739 Apr-Chr8 7128894 7136145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0739 278 476 EF-hand Containing Proteins AT5G54130 26.087 2.32e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0739 K12603 - gmx:100819402 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0739 8 7128894 7136145 Apr8g0739 8 7128894 7136145 ECH
Apr4g0433 4 3677602 3684493 Apr8g0739 8 7128894 7136145 PCT