Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0433 ATGCTGAGCGTGCTGCGCGTGCACCTCCCTTCTGATATTCCCATTGTAGGCTGTGAGCTCACGCCTTACGTGCTCCTACGCCGACCTGACAAAACCGTTACCACTGACGATGTCTCTGAAACCGCTCCCTTAGACGGCCATTTCTTGCGCTACAAGTGGTACCGCGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTTCATCCATCTGAGCAGGCCACGTTGCAGTGCCTAGGTTGTGTCAAGGCTAAAATACCTGTTGCCAAAAGTTACCATTGCACTCCAAAGTGTTTTTCTGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCTGCAAGTGCTGTTAATGAAAATGGAAATGAGGAAGAAGAGTTATTTGGTAGATTTAATAATTCTGGGTCTGGATCAATAAATACCGGCTTATCTGCCTCTGCATCATGTGCTAGCTTGACAAATGGGTCTGCTCCTGTGTATCCGGCAGCTGTTACACAACGAAGTGGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAGACATATACCCCAACAGCTGATGACGTTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGTAGAGACTAAACTTACTTTGGGGCATGCCAGCACAATACTAACCTCCCGTGTCATTCCTGCTCCATCACCTAGTCCACGCCGACAAATCCCAGTTGATGGGATGGGACATATGGATGTTGATGGGCGTATAACAACTTCAGGAACATTTACTGTTCTATCGTACAACATATTGTGTGATTCTTATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCCTGGCCATATCGCAGGCAAAATTTGTTACGAGAAATAGTTGGTTACAGAGCCGATATTATTTGTCTTCAGGAGGTTCAAAATGATCACTTTGAAGAATTTTTTGCTCCTGAACTGGACAAACATGGCTATTATGGTCTTTATAAGAGAAAAACAAATGAGGTATACAATGGCAACATTAATACAATTGATGGGTGTGCAACATTTTTCCGCAGAGACAGATTTTCACATGTGAAAAAATATGAGGCTGCGCAGTCTTTAACTGATGCTGTGATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGTCTAGTTAAGGATAATGTTGCACTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCCGTTGATAATCCAGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTCCAACAAGACTTAAAGGATGTCAAACTCTGGCAGGTGCACACACTCTTAAAAGGATTGGAGAAAATTGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGGGATTTCAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTGGACCCATCACATCCCGATTTAGCAGTTGACCCACTTAATATATTGCGTCCTCACAGCAAATTGGTTCACCAGTTGCCACTGGTCAGTGCTTATTCATCTTTTGCAAGAAAAGTTGGTCTTGGATTTGAGCAGCATAAACGAAGACTAGACAGCACTACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCTCTCTTGATTACATATTTTACACCGCGGATTCTTTGGTTGTGGAGTCATTGTTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACCGCCCTTCCTTCTCCTGAGTGGTCCTCGGATCATATAGCTCTGTTAGCTGAGTTTCGGTGCTGCAAGGGTAGATCTAGGCGCTGA 1788 0.4323 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVSETAPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNNSGSGSINTGLSASASCASLTNGSAPVYPAAVTQRSGGETWFEVGRSKTYTPTADDVGHVLKFECVVVDVETKLTLGHASTILTSRVIPAPSPSPRRQIPVDGMGHMDVDGRITTSGTFTVLSYNILCDSYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQNDHFEEFFAPELDKHGYYGLYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEAAQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARKVGLGFEQHKRRLDSTTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKGRSRR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0433 595 Gene3D Endonuclease/exonuclease/phosphatase 221 593 IPR036691 -
Apr4g0433 595 SUPERFAMILY DNase I-like 246 589 IPR036691 -
Apr4g0433 595 Pfam Endonuclease/Exonuclease/phosphatase family 253 579 IPR005135 GO:0003824
Apr4g0433 595 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 590 - -
Apr4g0433 595 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 590 - -
Apr4g0433 595 CDD Deadenylase_CCR4 252 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0433 Apr-Chr4 3677602 3684493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0433 K12603 - gmx:100775270 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0433 4 3677602 3684493 Apr4g0433 4 3677602 3684493 ECH
Apr4g0433 4 3677602 3684493 Apr8g0739 8 7128894 7136145 PCT