Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0730 ATGGACCAGCCTACAACTAATGTGGACCTTGAGCATGAGAAGATTGAAGATGAGAAAGAAGGAGGTCCCTTGTTGCATTGTGATCTTTGTGATACAGAATTAGTTCACAGATTGGCTCAAATGTTGATGCCAGCGTTAGCCTGTGCCTGTGTTGATAACACAACAGGAGACCCTTTCAAGTCTCCGGGTTCGGTGGCTGTTGATTTGAGAAAGGAAATGATAGATTTTGTTACCCAAAAAAGTGAATCGTTCATTGCTGAGTCTGTTATCTTAGAAGGAGACCCAGAAGGTGGAGTGTTGGATCATCCTTTTGATATCATTTCCTATTTTGTTGATGAATTTGCAAATTCCAAGAGGAATTTGTTGAGCCAGGTTTCAGGATGGCTACTAAGTGACTTGAGAGAGGACAAAATAGATGATTTTGTTCAGGAGATGGGAATGAATGGTTTTTGGTCACTGGATAGAAGAGAAGCAGATGCAAAAACTTGGCTCAAGAATGTTGACTTCAAGAACTTATTTCATTGTAGCATGAGTTTTAACAATGCACAAGATCTTGCCAACCATGTTGATGATTGCAACTTTAGATCTATGATTTGCTCAAATGAGGGATGTAATGCAAGGTTTAGTGCTTGTCATTTGAAGGAGCATGATTCAAATTGTCCTTTCAAGATAATTCCATGTGAACAAAAGTGTACAAATAGCATTATGAGACGCGAGATGGATAGGCACTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGTCCTTTCTATGCAGTGGGTTGTGGATCAGCTATTGCCCAATCTATGATTGAAAAACATTTTTCAGATGAACTTCAATCTCACTTATTGCACATACTCAATAGCATCCACAAGAAAGCAGCAGATGAAGATCTTAAACGACGAGTAGAGCAAATTGTACAGGCATCATCAAGCAGCAGGTTAGCAGAGGCTAAGGATGTAAGATCTTTTAAAAATATTGTGAAGGATCTTGAAGCTAAACTAGGGCCTCTTGAAGTGAGTGTCAAAGTGAAAACTAGTGCAGAAACAGTTGCCAACAATGAAGACAGTAGCACCAAAACAAAGGGTGTTGAGCAGCACACACAAGCTGAAGGGAGTGCCATCTTGGATAAGACTTGTACAGAGAATGCTATCAACAATAAAAATAGTGAGCATAAGGAAAGTGGAAAGCAAGGGTAA 1200 0.3958 MDQPTTNVDLEHEKIEDEKEGGPLLHCDLCDTELVHRLAQMLMPALACACVDNTTGDPFKSPGSVAVDLRKEMIDFVTQKSESFIAESVILEGDPEGGVLDHPFDIISYFVDEFANSKRNLLSQVSGWLLSDLREDKIDDFVQEMGMNGFWSLDRREADAKTWLKNVDFKNLFHCSMSFNNAQDLANHVDDCNFRSMICSNEGCNARFSACHLKEHDSNCPFKIIPCEQKCTNSIMRREMDRHCITVCPMKLVNCPFYAVGCGSAIAQSMIEKHFSDELQSHLLHILNSIHKKAADEDLKRRVEQIVQASSSSRLAEAKDVRSFKNIVKDLEAKLGPLEVSVKVKTSAETVANNEDSSTKTKGVEQHTQAEGSAILDKTCTENAINNKNSEHKESGKQG* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0730 399 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 1 357 - -
Apr8g0730 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 281 IPR013083 -
Apr8g0730 399 MobiDBLite consensus disorder prediction 351 399 - -
Apr8g0730 399 Pfam TRAF-type zinc finger 216 274 IPR001293 GO:0008270
Apr8g0730 399 SUPERFAMILY TRAF domain-like 231 290 - -
Apr8g0730 399 SUPERFAMILY TRAF domain-like 199 244 - -
Apr8g0730 399 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 1 357 IPR043211 -
Apr8g0730 399 MobiDBLite consensus disorder prediction 351 386 - -
Apr8g0730 399 ProSiteProfiles Zinc finger TRAF-type profile. 216 262 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0730 Apr-Chr8 7018445 7020793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0730 - - gsj:114391789 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0730 8 7018445 7020793 Apr8g0730 8 7018445 7020793 ECH
Apr4g0426 4 3623049 3627146 Apr8g0730 8 7018445 7020793 PCT