Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0718 ATGATTCAGTTTCTAGCAAAACCCGTTACGTTATTCGCCGCGAAACCTTCTCCGTTGGCCACTTTTGCAGCGGTTATCGTCCTCTGCATTCTGGGTTTCTATTCCCTGCATTTTCCTTACCCTTTTACCACTTCCAACAACGCCTCGCGCTTCCGCCACGTGTTCCTGTCTTCCTCGTCCAACTCCACCATATCTAACTACCTCCGCGCCCTCACCATGCACCCTCACCTCGCAGGAACGAAACCCGCTTCTCTAACTGCACGCTACGTTCTCAACCACTTCAACAACCTAGGACTCCGAACCCTAACTGCCAACCACACCGCTCTCCTCTCCTACCCCGTGCGCTCTTCCCTCACCGCGCATTTTAGCGACGGCACCAGCACTGAGTTTCGCCTCGCCGAACCGGGCGGCGAAGACGTCGTTCCGCCCTACCACGCGTACTCGCCGTCGGGTTCGGCGTGGGCGTTGGCGGTGTTCGTAAACTACGGCAGGGAGGAGGACTACCGTGCGCTGGCGGCGGCCGGGGTGGAGGTGGGAGGGTGCGTGGCGGTGGCGAGGGGCGGCGGAGGGATGGCGCGGGGGGCGGTGGTGGAGGTGGCGGAGAGGTTTGGGGCTGTGGCGGTGTTAGTGTTCGGCGATGGTAACACGTGGCGCGAGGGGTTTGAGCGGGGACACGTGATGAGAGGGGGAATAGGGGATCCACTGAGTCCAGGGTGGGGTGGGGTTCATGGCGGCGAGAGTTTGGGTTTGGAAGATAGTGAGGTTTTAAAAAGGTTTCCTAAAATTCCATCCATGCCCTTGTCTTTTGCAGCCGCTGAGAGGATATTGTCCTCTCTTGGTGGCTCTCCTCTGCCCTTGGATTGGAGGGCTACCCTAAAGTCCTCCAAGGTTAGGAATGTTGGTCCTGGTCCCACACTCCTCAACTTTACTTATCAGGGAGAAAAAAAGGTGGCTACCATTGAAAATGTTTTTGCCATTATAAAGGGACTGGAGGAACCTGATCGCTATGTTCTGCTTGGGAACCATAGGGATGCATGGACATATGGTGCTGTTGATCCCAACAGTGGGACAGCTGCACTACTTGACATTGCTCGTAGATATTCAATTCTATTGCGTTTGGGGTGGTCTCCACGTAGGACAATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATTGGATCCACCGAATGGGTTGAACAAAACCTTGTTAATCTTGGTTCCAAAGCTGTAGCATACCTTAATGTAGACTGTGCTGTTCAAGGGCCTGGTTTCTTTGCTGGTTCAACTCCTCAGCTAGACAATCTCCTTCTTCAGGTCACAAAGAAGATCAAGGATCCTGACTCTCTGGGTACAACAATATATGAGAATTGGGTGGCTGTTGGTGGAAACTCTAATATTCAAAGACTTAGTAGAGTTGATTCTGATTTTGCTCCATTTTTGCAACATGCGGGGGTTCCATCAATTGATATATATTATGGAAAAGATTTTCCTGTCTATCACACTGCTTTCGACTCCTATAGCTGGATGACAGTGTCTGGAGATCCATTCTTTCAGCGTCATGTGGCTGTTGCCGGAATATGGGGTCTTCTAGCCCTTCACCTTGCTGATGATTCCATTATACCTTTCAATTATCTTTCGTATGCGGATCAGTTAAAGGTGTACAATAACATATTGAGGAACTTGTTAGACAAGGGGATTTCTTTACATCCACTAAATACATCGATTGAAGAATTTGCTTCTGCTGCCAAAGATGCTAATGATGAATCAAAGAAGCTGAGATTGCAAGAAACTTCAGGTCTTTTAGTAGATATGAAAATGCGAGGATTGAATGATAGACTAATGCTTGCAGAAAAAGGCTTCTTGGATGGGGATGGACTTCGAGGAAGGCAGTGGTTCAAGCATCTTGTTTTTGGGCCTCCTAGCGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATTGCTGACTCTATGTCTAGGACGATTAAAATGAGTGAAAAAGAAAGGTTAGCAGCAATTCAGCATGAGATCTGGAGAGTTGCAAGGGCCATTCAAAGAGCTGCTTCAGCACTAAGAGGGGAATTGACCAAAAACTAG 2100 0.4938 MIQFLAKPVTLFAAKPSPLATFAAVIVLCILGFYSLHFPYPFTTSNNASRFRHVFLSSSSNSTISNYLRALTMHPHLAGTKPASLTARYVLNHFNNLGLRTLTANHTALLSYPVRSSLTAHFSDGTSTEFRLAEPGGEDVVPPYHAYSPSGSAWALAVFVNYGREEDYRALAAAGVEVGGCVAVARGGGGMARGAVVEVAERFGAVAVLVFGDGNTWREGFERGHVMRGGIGDPLSPGWGGVHGGESLGLEDSEVLKRFPKIPSMPLSFAAAERILSSLGGSPLPLDWRATLKSSKVRNVGPGPTLLNFTYQGEKKVATIENVFAIIKGLEEPDRYVLLGNHRDAWTYGAVDPNSGTAALLDIARRYSILLRLGWSPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGPGFFAGSTPQLDNLLLQVTKKIKDPDSLGTTIYENWVAVGGNSNIQRLSRVDSDFAPFLQHAGVPSIDIYYGKDFPVYHTAFDSYSWMTVSGDPFFQRHVAVAGIWGLLALHLADDSIIPFNYLSYADQLKVYNNILRNLLDKGISLHPLNTSIEEFASAAKDANDESKKLRLQETSGLLVDMKMRGLNDRLMLAEKGFLDGDGLRGRQWFKHLVFGPPSDHESKLDFFPGIADSMSRTIKMSEKERLAAIQHEIWRVARAIQRAASALRGELTKN* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0718 699 SUPERFAMILY PA domain 109 324 IPR046450 -
Apr8g0718 699 Gene3D - 116 313 - -
Apr8g0718 699 Coils Coil 577 597 - -
Apr8g0718 699 PANTHER F10A2.10 PROTEIN-RELATED 37 697 - -
Apr8g0718 699 Pfam Peptidase family M28 322 509 IPR007484 -
Apr8g0718 699 CDD M28_PSMA_like 318 544 - -
Apr8g0718 699 Pfam Transferrin receptor-like dimerisation domain 568 692 IPR007365 -
Apr8g0718 699 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 37 697 IPR039373 -
Apr8g0718 699 Gene3D Zn peptidases 62 543 - -
Apr8g0718 699 Gene3D - 546 697 IPR036757 -
Apr8g0718 699 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 694 IPR036757 -
Apr8g0718 699 SUPERFAMILY Zn-dependent exopeptidases 60 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0718 Apr-Chr8 6930382 6936276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0718 K01301 - gmx:100817485 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0718 8 6930382 6936276 Apr8g0718 8 6930382 6936276 ECH
Apr4g0418 4 3569297 3574459 Apr8g0718 8 6930382 6936276 PCT