Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0418 ATGGCGATGAAACCCATTAACGTATTGATCACAAAGCCTTCACCTTTGGGAAGCATGGTGGTGATGCTGATCCTATGCATTATGGGTTTCTATGCCCTGCATTTCCCTCACTCTTCGTCTTCTTCTTCATCATCTTCCTCCACTCACTTAGAAGCCCTCTTCCTCTCAACTTCCTCAAACTCCAGCATCTCCTCCTACCTCCGCGACCTCACCATGCACCCTCACCTCGCCGGAACAAAACCCGCTTCCGACACCACTCGCTACGTCATCAATCACTTCACTTCCTTAAACCTTCAAACCCACACCGTAACCTACAACACACTCCTCTCCTACCCCGTGCACTCTTCCCTATCCGCGCATTTTGGCGATGGCTCTTCGTTAAACCTTCCCCTCACCGAACCAACCGTACCGGGCGTGGTGCCTCCCTACCACGCGTACTCTCCGTCAGGTGCGGTTCACGCGCCGGCGGTGTTCGTGAATTACGGGAGGGAGAAGGACTACCGTGCGTTGGGGTTGATGGGGGTGAACGTTAGTGGGTGCGTGGTGATAGCGAGGAAAGGAGGGGACTTGGGGAGGAGCGCGGTGGTTGAGAGGGCGGAGGCAAATGGGGCGGCGGCGGTGTTGATTTACGGCGAGAGTGACACGTGGCGGAAGGGTTTCGAGAGAGGACACGTGATGAGGGGCATAGGGGACCCACTTACTCCTGGTTGGGCTGGGGTTGATGGTGCTGAGAGTTTGGGTTCGGAACATTCTGAGGTCTTGAAAAGGTTTCCTAAAATTCCATCCATGCCCTTGTCTGCTGACACTGCTGACACCATTTTGTCCTCTCTTGGAGGTCTTCCTCTGCCCCAGGAATGGAGGAGCACGCTGCGGTCCAAGTTCAGAAATGTTGGTCCTGGCCCCACCTTTCTCAATTTCACTTACCAGGGTGAGAAGAAGGTGGCCACCATTGAAAATGTTTTTGCTGTTATAAAGGGATGGGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCGCTACTTGACATTGCACGTCGATATTCTGTTCTATTGGGCTCAGGGTGGAAGCCAAGGAGAACAATCATTCTCTGCAGTTGGGATGCAGAAGAATTTGGGATGATAGGATCCACCGAGTGGGTTGAACAAAACCTTATTAATCTGGGTTCCAATGCTGTAGCATACCTTAATGTGGACTGCGCTGTTCAAGGCCCTGGTTTCTTTGTTGGCTCAACTCCTCAGCTAGACAGTCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGACTCTGAGGGTGTATCGGTATATGACAATTGGGCTGCTGCTGGTGGAGCCAATAATGTAATTCAGAGGCTTAGTGGAGTTGATTCTGATTTTGCTCCGTTTGTGCAACATGCAGGGGTTCCATCCATTGATATGTATTATGGAAAAGATTTTCCTGTCTATCACACTGCTTTTGACTCCTATAACTGGATGATAGAGTATGGAGATCCATTCTTTCAGCGCCATGTTGCTGTCACTGGAGTTTGGGGGCTTCTAGCTCTTCACTTGGCTGATGATTCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGTTGTACAATAACATGTTGAGCAACTTGATAGACCAGCAAATTTCTCTGCATCCGGTAACTGTGTCAATTCAAAAATTTGCTTCTGCTGCTATAGAAGCTGATGATGAATTAAAGAAACTGAGATTGCAAGAAACTACAGGTTGTGTTGCAGACATGAAAAAGAGAGCGTTGAATGATAGACTAATGCGTGCTGAAAAAGGCTTCCTGGATGCAGATGGACTTCAAGGAAGGAAGTGGTTCAAGCATCTTGTGTATGGGCCTCCAAGTGACCATGAAAGGCTGAATTTCTTCCCTGGGATCACTGATTCCATGATCATTAGGTCAACAAATGGAGGAGAAAGAGAAAGGCTAGCAGCAATTCAACATGAGATATGGAGGGTTGCCAGAGCCATTCGTAGAGCTGCTTCTGCACTCAGAGGAGAATTCACCTGA 2088 0.4871 MAMKPINVLITKPSPLGSMVVMLILCIMGFYALHFPHSSSSSSSSSSTHLEALFLSTSSNSSISSYLRDLTMHPHLAGTKPASDTTRYVINHFTSLNLQTHTVTYNTLLSYPVHSSLSAHFGDGSSLNLPLTEPTVPGVVPPYHAYSPSGAVHAPAVFVNYGREKDYRALGLMGVNVSGCVVIARKGGDLGRSAVVERAEANGAAAVLIYGESDTWRKGFERGHVMRGIGDPLTPGWAGVDGAESLGSEHSEVLKRFPKIPSMPLSADTADTILSSLGGLPLPQEWRSTLRSKFRNVGPGPTFLNFTYQGEKKVATIENVFAVIKGWEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRYSVLLGSGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSNAVAYLNVDCAVQGPGFFVGSTPQLDSLILEVTKKVKDPDSEGVSVYDNWAAAGGANNVIQRLSGVDSDFAPFVQHAGVPSIDMYYGKDFPVYHTAFDSYNWMIEYGDPFFQRHVAVTGVWGLLALHLADDSILPFNYVSYANELQLYNNMLSNLIDQQISLHPVTVSIQKFASAAIEADDELKKLRLQETTGCVADMKKRALNDRLMRAEKGFLDADGLQGRKWFKHLVYGPPSDHERLNFFPGITDSMIIRSTNGGERERLAAIQHEIWRVARAIRRAASALRGEFT* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0418 695 CDD M28_PSMA_like 290 542 - -
Apr4g0418 695 SUPERFAMILY PA domain 108 321 IPR046450 -
Apr4g0418 695 Pfam Peptidase family M28 319 507 IPR007484 -
Apr4g0418 695 SUPERFAMILY Zn-dependent exopeptidases 58 539 - -
Apr4g0418 695 Gene3D Zn peptidases 61 541 - -
Apr4g0418 695 Gene3D - 544 695 IPR036757 -
Apr4g0418 695 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 36 695 IPR039373 -
Apr4g0418 695 Gene3D - 115 310 - -
Apr4g0418 695 Pfam Transferrin receptor-like dimerisation domain 566 690 IPR007365 -
Apr4g0418 695 PANTHER F10A2.10 PROTEIN-RELATED 36 695 - -
Apr4g0418 695 SUPERFAMILY Transferrin receptor-like dimerisation domain 541 693 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0418 Apr-Chr4 3569297 3574459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0418 K01301 - gmx:100818733 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0418 4 3569297 3574459 Apr4g0418 4 3569297 3574459 ECH
Apr4g0418 4 3569297 3574459 Apr8g0718 8 6930382 6936276 PCT