Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0716 ATGGATTTGGAAGTAGTTCCATCTTCCCGGGATTTGTTGAAATGTTGCAACTGTGAGTGTAGTTGCTCCTTGCTAGCTCAATCATCCGGCACTTGGATGCGTTCTGTCAAACGTAAACATGATGAGTTCAAGCTGGATAACCCATTGCCTATGCCTGCATTTGCGCGGATTGAAATCGAGAACGAATGTGCAGCCTTACGTGAGATGGTTACCATGCAGCAGAAAACTATTCAAGATTTGAATGCTGAATTGGAGGAGGAGAGGAATTCTTCATCCACAGCTGCGAATGAGGCCATGTCTATGATATTGAGGCTGCAGAGGGAGAAGGCAGAGGTTCAAATGGAGGCACGGCAATTCAAGCGATATGCAGAGGAGAAGATGACACATGATCAGGAGGAGCTTCTATCTTTGGAGGATTTGTTGTATAAGAGAGAACAGGTAATTCAGTCACTTACTTGTGAAGTTCAGGCTTACAAGCACAGGATGATGAGTTTTGGCCTCACTGAGGATGAGGTAGACAGTGATCGATTTGAGCTTCCGACTTATGAATACCCTCCTTTGAAATGTAATGTGATGCATGGTGCTATGGATGCTGATAATGATGACACCGATATTGAGAAGTATGCATTTGGTGAAACTCCGAGTGACCGTTTGAGGAACTTGGAAAATAGGATTTCTCAAATGGAGAAAACTCCCACTTACAGCCAGATGGATGGAGATTTTACAGGAAAAAATATTCTAGAGAAAGTGATTGTTGGACAGTCTCCAAGTCGGACTATGCATTCAAGGAAATTTTCCTGTGACTCAACATCATTTGGTGGGATGGGTAAGGAAACAGGTCCTGAGTTTGTGATGGATTCTCCCAAGGTCAATGGTAACTATAAGAAAGATTATTTTTCACAGTCAGATGACCCTTCCAATTTGAAGAAGGTAGATAATGCTTCCGAAGGTGATGATATGAGTGACAGAATTTATACAATTGACTCTGTTCATTGTGGGGCACCGTATAATGGTTTCACAGAATCCAAAGCTGGAACTGGTGGTTTTGAAGATTATGCAACTACTCCAAGAGAGTCAGGGAACCATACTGATTTTGAGGATCCCTACATAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCGATCATTTCAATGCGCACTGATAAAGCACAACTTGTGTTACTGAAGGAAATAGCTCAACATCTGTGCAAAGATATGTCACCACAAAGAAAAATTGCAAGGAAGCCATATTTTGCTGGCAACTCTTCATTCTCGTCAGTTTTCAAGTATGTTCAGTGGGTTTCATCACTTGTTTTCTGGAGAAAGAGAGCACGTCAAAGCAAGTATATGTTCGGGCTACCGGCCGAAAGTACTGGTTTGCTGCTGCTGCTGGACAAGGGAACACGGGCAAGGCCATGGAGATGTATTTCAAGTACACAAGTGGGAGGAGAATAG 1482 0.4298 MDLEVVPSSRDLLKCCNCECSCSLLAQSSGTWMRSVKRKHDEFKLDNPLPMPAFARIEIENECAALREMVTMQQKTIQDLNAELEEERNSSSTAANEAMSMILRLQREKAEVQMEARQFKRYAEEKMTHDQEELLSLEDLLYKREQVIQSLTCEVQAYKHRMMSFGLTEDEVDSDRFELPTYEYPPLKCNVMHGAMDADNDDTDIEKYAFGETPSDRLRNLENRISQMEKTPTYSQMDGDFTGKNILEKVIVGQSPSRTMHSRKFSCDSTSFGGMGKETGPEFVMDSPKVNGNYKKDYFSQSDDPSNLKKVDNASEGDDMSDRIYTIDSVHCGAPYNGFTESKAGTGGFEDYATTPRESGNHTDFEDPYIKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKDMSPQRKIARKPYFAGNSSFSSVFKYVQWVSSLVFWRKRARQSKYMFGLPAESTGLLLLLDKGTRARPWRCISSTQVGGE* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0716 493 Coils Coil 370 397 - -
Apr8g0716 493 MobiDBLite consensus disorder prediction 298 317 - -
Apr8g0716 493 Pfam Zein-binding 65 155 IPR007656 -
Apr8g0716 493 Coils Coil 63 125 - -
Apr8g0716 493 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 467 - -
Apr8g0716 493 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Apr8g0716 493 PANTHER BNAANNG28530D PROTEIN 1 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0716 Apr-Chr8 6897334 6901810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0716 - - aprc:113872114 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0716 8 6897334 6901810 Apr8g0716 8 6897334 6901810 ECH
Apr4g0412 4 3507286 3510297 Apr8g0716 8 6897334 6901810 PCT