Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0412 ATGGATTTGGAATCTTCCGGTGATTCGGTGAGTTGCGGCAAATACTGTGAAGGTGAGTGTAATTGCAACATGGAAGGGGATTGGCACCGTTCCGTGAAACGGAAACACGATGGTTTGGAACAGGATTGCCAATTCCCCGTGGCACGGGTGGAAATTGGGAGTGAATGTATTGCATTACGGCAGGCTGTGAGTAGTCAACAGAAAGCTATACAGAATTTGTATGCTGAATTGGAAGAGGAGAGGAATGCGGCTTCCTCGGCCGCGAATGAGACAATGTCAATGATATTGAGGTTGCAAAGGGAAAAGGCTGAACTTCAAATGGAAGCTCGTCAATTCAAGCGGTTCGCGGAGGAGAGGACGTCGCACGATCAGCAGGAGCTATTAGCATTGGAGGATTTGTTGTACAAGAGAGAGCAGGCAATTCAGTCACTCATGTGTGAAGTTCAGGCTTATAAGCACAGGTTGATGAGTTTTGGCCTCAGTGAATCAGAGGCAGAAAGGGATCAGTATGAATTTCCCCCTTATGAGTACCCTGCTTTGAGATGTAAGGTAATGCATGCTTCTGTTGATGGTGATAATGACGACATAGACATTGAGAAATATGTATTTGGGGAAACTCCAAGGGATCGTTTGAGGAACCTGGAAAGTAGGATATCTCAAATGGAGAGAAGTCCCACTTATAGCCAGATGGATGGGGATTTTTCAGGGAAAAATATTCTAGAGAAGGTGATAGTTGGACACTCTCCGAGACGAAATAAACATAACAGGAAATTTTCCTGTGATTCGTCTTCATTAGGCCCTGAGTATATGATGGATTCTCCTAAGTTCACTGGTAGTGTTAGGAAGATAGATTATATCTCGCAAGCGGAGGACCTTTCCAATTTGAAGAAAATGGACAATGCATCAGAAGCTGGTGATGATATGATTGACAGAGTCTATACAATTGACTCTGAGTTCAAGGCTGGAGCTGGTGTTTATGATGATTATGCAGCCACTCCAAGGGAGTATGTTAATCATGCAGATTTTGAAGATCCGTACATAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTTTTGCTGAAGGAAATAGCTCAACAATTGTGCAAAGAGATGTCACAGCAGAAAAAAATGACAGCAAGATCTTTTATTGGCAGCTTGTCCTTCTTGACTGTTTTTAAGTGGATTGCATCTATTGTCTTCTGGAGAAGGAAAGCTCATCAAATCAAGTATATGTTTGGGCTACCATCTGACAGCGTCGGCTTGCTGATGCTGCTTGACAAGGGACCCCATGTAGGGTCATGGAGATATCTTCAAAATACACAAGTGGGAGATTAG 1398 0.4349 MDLESSGDSVSCGKYCEGECNCNMEGDWHRSVKRKHDGLEQDCQFPVARVEIGSECIALRQAVSSQQKAIQNLYAELEEERNAASSAANETMSMILRLQREKAELQMEARQFKRFAEERTSHDQQELLALEDLLYKREQAIQSLMCEVQAYKHRLMSFGLSESEAERDQYEFPPYEYPALRCKVMHASVDGDNDDIDIEKYVFGETPRDRLRNLESRISQMERSPTYSQMDGDFSGKNILEKVIVGHSPRRNKHNRKFSCDSSSLGPEYMMDSPKFTGSVRKIDYISQAEDLSNLKKMDNASEAGDDMIDRVYTIDSEFKAGAGVYDDYAATPREYVNHADFEDPYIKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQQLCKEMSQQKKMTARSFIGSLSFLTVFKWIASIVFWRRKAHQIKYMFGLPSDSVGLLMLLDKGPHVGSWRYLQNTQVGD* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0412 465 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 440 - -
Apr4g0412 465 Coils Coil 347 374 - -
Apr4g0412 465 PANTHER BNAANNG28530D PROTEIN 1 440 - -
Apr4g0412 465 Pfam Zein-binding 58 148 IPR007656 -
Apr4g0412 465 ProSiteProfiles GTD-binding domain profile. 54 152 IPR007656 -
Apr4g0412 465 Coils Coil 60 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0412 Apr-Chr4 3507286 3510297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0412 - - gmx:100797605 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0412 4 3507286 3510297 Apr4g0412 4 3507286 3510297 ECH
Apr4g0412 4 3507286 3510297 Apr8g0716 8 6897334 6901810 PCT