Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0671 ATGTCGGTGAAGGAGTGCGACCACCACAAGGGGAAGAGGAGGAGAATATTCCTGCGAATATTCTGGGGCATAATAGTGTTTCTCTTCATTGTGCTGCTCACAATCCTTCTAATTTGGGCAATTCTAAGACCCTCAAAACCTTCCTTCATCCTCCAAGACGTCACCGTTTACGCCTTCAACGCCACCGTTCCAAATTTCTTAACCTCCAATTTCCAAGTCACACTCGTATCACGCAACCCCAACGACCGCATCGGCGTCTATTACGACCGTCTCGACACCTACATCAGTTACCGGAGCCAGCAAATCACTTACCGGACCGCTATCCCTCCATCGTATCAGGGTCACAAAGAATTAAACGTTTGGTCGCCGTTTGTTTACGGCACAAACGTTCCTGTCGCGCCTTTTAATTTTGAAGGTCTCCGCCAGGATCAGATTAACGGTAACGTCCTCGTTACCGTTAGAAGTGACGGCAGAGTTCGTTGGAAGGTTGGTGCCTTCATCTCAGGCCGTTACCACCTCTTCGTCCGTTGCCCCGCGTACATCAGTTTCGGCCCACGGAATAGCGGAGTTGTCGTTGGCGAAAACGCCGTTAAGTTCCAGCTAGTCCAACCCTGCTCCGTTAGCGTTTAG 630 0.5048 MSVKECDHHKGKRRRIFLRIFWGIIVFLFIVLLTILLIWAILRPSKPSFILQDVTVYAFNATVPNFLTSNFQVTLVSRNPNDRIGVYYDRLDTYISYRSQQITYRTAIPPSYQGHKELNVWSPFVYGTNVPVAPFNFEGLRQDQINGNVLVTVRSDGRVRWKVGAFISGRYHLFVRCPAYISFGPRNSGVVVGENAVKFQLVQPCSVSV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0671 209 Pfam Late embryogenesis abundant protein 77 177 IPR004864 -
Apr8g0671 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
Apr8g0671 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0671 Apr-Chr8 6250306 6252185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0671 - - gmx:100788592 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0671 8 6250306 6252185 Apr8g0671 8 6250306 6252185 ECH
Apr4g0374 4 3174602 3175330 Apr8g0671 8 6250306 6252185 PCT