Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0374 ATGTCGGTGAAAGAGTGTAACCACCACAAGGGAAGGAAGAAAAAAATATTCCGGCGCATATTCTGGGGTATAGTGATCTTCTTGTTCATCGTGCTGGTGACGATTCTGATAATCTGGGCAATCCTAAAGCCTTCAAAGCCAACCTTCATCCTCCAAGACGTCACCGTTTACGCCTTCAACGCAACCGTCCCCAACTTCCTCACCTCAAACTTCCAAGTCACCCTCTCCTCTCGGAACCCAAACCAAAAAATCGGCATCTACTACGACCGCCTCGACACCTACGTCACTTACCGGAACCAGCAGGTCACCTTCCGCACCTCCATACCTCCCTCTTACCAAGGTCACAAGGAAGAGGACGTTTGGTCGCCGTTTGTCTACGGCACTGACGTCCCCGTCGCTCCCTATAACTTCGTTGGCCTCAGTCAAGACCAGTCTAACGGCAACGTCCTCGTCATCGTTAAAATTGACGGTAAAGTCCGGTGGAAGGTCGGTGCCTTCATCTCCGGCCACTACCACCTCTATGTACGCTGCCCTGCTTTCATCACCTTTGGCCCCCAGAGCACCGGCGTTGCCGTTGGCAATAACGCCGTTAAGTATCAGTTGGTCCAGCGTTGCACCGTTGGCGTTTAA 630 0.5238 MSVKECNHHKGRKKKIFRRIFWGIVIFLFIVLVTILIIWAILKPSKPTFILQDVTVYAFNATVPNFLTSNFQVTLSSRNPNQKIGIYYDRLDTYVTYRNQQVTFRTSIPPSYQGHKEEDVWSPFVYGTDVPVAPYNFVGLSQDQSNGNVLVIVKIDGKVRWKVGAFISGHYHLYVRCPAFITFGPQSTGVAVGNNAVKYQLVQRCTVGV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0374 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Apr4g0374 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Apr4g0374 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0374 Apr-Chr4 3174602 3175330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0374 - - gmx:100795832 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0374 4 3174602 3175330 Apr4g0374 4 3174602 3175330 ECH
Apr4g0374 4 3174602 3175330 Apr8g0671 8 6250306 6252185 PCT