Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0660 ATGGAAGAGACCAAATCCAAGTTCAAGAGGATTTGCGTGTACTGTGGAAGCAGTTCCGGCAACAAAGCTAGCTACCAAGAAGCTGCTGTAGAACTAGGCAAGGAACTGGTTGAGAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTGGGCGTTATCCCAAGAAGTCTCATGCCAAGAGAGATAACTGGTGATCCTATTGGAGAAGTGAGAGCCGTATCTGATATGCATCAAAGGAAAGCTGAGATGGCTCGTCAAGCCGATGCCTTCATTGCCCTTCCTGGGGGATATGGAACCCTTGAAGAATTGCTTGAAATCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCGGTGGGGCTATTGAATGTGGATGGATTTTACAATTCCCTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATTTCTCCAAAGGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAACAATTGGTGAGGGAGCTTGAGGAACATGTACCTGAGCGAGATGAAGTTGTATCCAAGTTGGTGTGGGAAGAAAGACTAAATTACGTGCCTGAATCAGAAGTTGCCATGTGA 642 0.4766 MEETKSKFKRICVYCGSSSGNKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRSLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKQLVRELEEHVPERDEVVSKLVWEERLNYVPESEVAM* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0660 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 211 - -
Apr8g0660 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Apr8g0660 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 211 - -
Apr8g0660 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
Apr8g0660 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 185 IPR005269 GO:0009691|GO:0016787
Apr8g0660 213 Gene3D - 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0660 Apr-Chr8 6102033 6105903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0660 K22522 - gmx:100816928 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0660 8 6102033 6105903 Apr8g0660 8 6102033 6105903 ECH
Apr4g0370 4 3146316 3150428 Apr8g0660 8 6102033 6105903 PCT