Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0370 ATGGAAGAGCTCAAATCCAGGTTCAAGAGGATTTGCGTGTTCTGTGGGAGTAGTTCAGGGAAGAAAGCTACCTATCAAGAAGCTGCAGTAGAACTTGGCAAGGAACTGGTAGAGAGAAGAATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTTATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTGATGCCTAGAGAGATAACAGGTGATCCTATTGGGGAGGTGAGAGCCGTATCTAATATGCACCAAAGGAAAGCCGAAATGGCCCGTCAAGCTGATGCTTTTATTGCCCTCCCTGGAGGATATGGTACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCAGTGGGCCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTAGATGAAGGCTTTATATCCCCTACGGCACGGCGCATTATCGTGTCTGCACCCACAGCCAAACAATTGATGCTAGAGCTAGAGGAACATGTTCCTGAGCAAGATGAGTTTGCATCCAAGTTGGTGTGGGAAACGTGCCTGAATCAGAAGTTGCCATGTGATTGA 633 0.4787 MEELKSRFKRICVFCGSSSGKKATYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPREITGDPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWETCLNQKLPCD* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0370 210 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
Apr4g0370 210 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG2 2 202 - -
Apr4g0370 210 PANTHER LOG FAMILY PROTEIN YJL055W 2 202 - -
Apr4g0370 210 SUPERFAMILY MCP/YpsA-like 7 185 - -
Apr4g0370 210 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Apr4g0370 210 Gene3D - 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0370 Apr-Chr4 3146316 3150428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0370 K22522 - gmx:100792663 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0370 4 3146316 3150428 Apr4g0370 4 3146316 3150428 ECH
Apr4g0370 4 3146316 3150428 Apr8g0660 8 6102033 6105903 PCT