Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0653 ATGACGCTTGGCTCAGCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGCGGAGAAAAAGGTATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGGGATGACATATACATGCGCTCTTGGACTGGCACCATTATTGGCCCCCACAATGTAAATATTCTTCAGTTACTGCTCTGCTTGCAGGTTCTAAAGTTGTGTTCTTTTTTACCATTTATCTGTCAGACTGTACATGAAGGAAGAATTTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGCGTTCGGTTTCATTCACGGATCAATATGACTTGCGTTAATCACGAAACTGGAGTGGTTGAACCAAAGAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGATATTCTGACCCAGCTGAAGAAGGAAATGGCGGCTCCTCATAACAGGAAGCTTGTCCAGCCTCCCGAAGGTACCTACTTTTAG 513 0.4444 MTLGSAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVNILQLLLCLQVLKLCSFLPFICQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0653 170 SUPERFAMILY UBC-like 10 170 IPR016135 -
Apr8g0653 170 Gene3D Ubiquitin Conjugating Enzyme 3 170 IPR016135 -
Apr8g0653 170 PANTHER - 10 59 - -
Apr8g0653 170 PANTHER - 82 164 - -
Apr8g0653 170 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 82 164 - -
Apr8g0653 170 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 59 - -
Apr8g0653 170 Pfam Ubiquitin-conjugating enzyme 82 160 IPR000608 -
Apr8g0653 170 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 170 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0653 Apr-Chr8 6022885 6026008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0653 K10704 - cpap:110810615 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0653 8 6022885 6026008 Apr8g0653 8 6022885 6026008 ECH
Apr4g0362 4 3088576 3092142 Apr8g0653 8 6022885 6026008 PCT