Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0362 ATGACGCTCGCCTCTGCAGGATCCAGTGTCGTCGTACCAAGGAACTTCAGATTGCTGGAGGAACTTGAAAGGGGAGAAAAAGGAATTGGAGATGGCACAGTCAGCTATGGAATGGACGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGCCCCCGCAATACTGTGCATGAAGGAAGAATTTATCAGTTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAATATGGCTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGGAAATTGGCAACGAGGGTTTACCATGGAGGATATACTGACCCAGCTGAAGAAGGAAATGGCGGCTTCTCAAAATCGCAAGCTTGTCCAGCCTCCAGAAGGTACCTATTTCTAG 441 0.458 MTLASAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPRNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVESKKFGLLGNWQRGFTMEDILTQLKKEMAASQNRKLVQPPEGTYF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0362 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
Apr4g0362 146 Gene3D Ubiquitin Conjugating Enzyme 2 146 IPR016135 -
Apr4g0362 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Apr4g0362 146 PANTHER - 9 140 - -
Apr4g0362 146 SMART ubc_7 16 144 - -
Apr4g0362 146 Pfam Ubiquitin-conjugating enzyme 43 134 IPR000608 -
Apr4g0362 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0362 Apr-Chr4 3088576 3092142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0362 K10704 - csv:101205080 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0362 4 3088576 3092142 Apr4g0362 4 3088576 3092142 ECH
Apr4g0362 4 3088576 3092142 Apr8g0653 8 6022885 6026008 PCT