Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0585 ATGGAGGTTGGGGAAATGGACAGAAAGGAGCCACAACTTGAGGTTCCTTGGATCCCCACCACTCCTGTTAAGCCTGGTCCTCCAAAACCAGTGCCGATCTGCACAACTGGGGAAGGAATGGGCCATCATGCAAATGGAGCAGTTGCATGTGCTGAATTCTCACTTGGTGAAGAGAAAAATTGCAGGTCACGTGATGGGTCAGTTGCAAACATTGCAGGTGACAATGGAAAAACTTATAAACAGACAGCTTCTGATGCTGTTTCCATCTACGGTAATCCCGGCTTTACGGAACATTTGTTCACGGTAGTGGCAGAATCGGCAAACTCAAATGTGATCCAACAAGAGGGTAACGATGGATTGAAGAATCCATTTATTCCTTCGATCATCACCCGCGACAATTCCCGGGATTCTCAGGAAATATCATACATTGCATGGTGTAGCAAGAGAACTTCCCAAGATACCTCATTTACAGTTGACACCAACAAAGTAGAAACCAGACAAATAGCATCAATGCAAATCACTGTGGAAGAAAAGGATCCTGGAGGGGAAGAGAAAAATGTCCCAGCCAAAAAGTTTGACAACAATGTACCACCAATCAATAAAGAACTCTGTGACCCACTCACAGAATTCACTTCTGTTTCTTCTCCATTCAAGGACAATGACAACCTAGACAAGGGAAGCAGCCACGATACTGATCTGAATAAAACACCTCAACAAAAATCAAGGAGAAGAAAACACCGTCCCAAAGTCATCAAAGAAGACAAACCCAAAAGAACTCGGAAGCCTGCTACCCCGAAGGCTGTTCAATCAAAAGACAACCTGACTGGCAAGAGGAGGTATGTGAGAAGGAAGGGATTGAACAAGACTGCTGCTTCTCCAGCAGAAGTGACTGGAGAATTAGCTAAAGAAATGCCTGGATCTGCCAACATATCTTGTAGAAGATCCTTAAATTTTGACATGGGAACAAAAGATGGAAGTTCTGTAGACATAGAAAATGCAACACTTCTTGGCAAAGAAAATGGAGTAGTCGTTCAACAAACTGATGTAGGCCTAGCCAATGATCTGAACAGTTACATGAAGCAGGCATCAAACAGTCACATGTCATTACCAGAAGACACACAAGCCCCCAGCACACCGTCAAGAAAAAGGTCTGGGACAAAGACAACAGAAAACTCAACTGGCAAGAGGAAGTATGTGAGAAGGAAGGGATTGAACAAGACTTCTACTCCTCCAACAGAAGTGACTGGAGTATTGACTAAAGAAATGCCTGGATCTGAGAAAATATCTTGTATCTCATTAAGTTTTGACATAGGAACAAAAGATCAAAGTTCTGCAGACAGAGAAAATGAAACTGCACTTTTAGGCAAAGAAAATGTAGTCATACAAGAAACTGACGTAGGCATAGCCAATAATCTGAGCATAGCCAATAATCTGAATAGCTCCATGAAGCTGGCATCAAACTGTCACATGTCATTACCAGAAGACACACAAGCCCCAAATACATCTACTTCAAGAAAAAGCTCCGGGACAAAGACAATGGAAAACTCAACTGGCAAGAGGAAATATGTGAGAACAAAGCAATTGAATAAAACTTCTCCAACAGGAGTGACTGGAGAATTGACTAAGGAAATGCCTGGATCTGTCAAAATGTCTTTTGTAAGCTCCTTAAATTTTGACATTGAAACAAAATATCAAAGTTCTGCTGATTTAGAAAATGCAACTGTACTTTTGAGCAAAGAAAATGGAGCAGTCATAAAAGAAACTGTAGGCCTAGCCTATGATCTGAACAGTTCCATGAAGCAGGCATCAAATAGTCACATGTCATTGCCAGAAGACACACAATCCCCAAATACATCTTCAAGAAAACGCTCTGGGACAAAGACACAGGAAAACTCAACTGGCAAGAGGAAGTATGTGAGAAGGAAAGTAGTGAACAAGACTTCTCCAACAGAAGTGACTGGAGAACAGACTAAAGAAAAGATGCCCGAATCTGCCCAAATGTCAAGTATAGGGTCTGTAAATTTTGATGAAAGAGCAAGAGATCAAAGTTCTGCAGTGAAAGAGTGTGTAACTGTGCATTCAGGCAATGAAATTGGTGAAGTCATGTGGGAAATGAAGCAAGTACCTTATGATACACAATTTCCAAGTACATCTTCAAAAATTAACCTCCCTGGGGCAAAGACAGAAAACCCTACTGGCAAGAGGAAGAATGTGAGAAAGAGAGGATTGACTAATGCTGCTCCTATTCCTCCAACAGAAATGAAAGATTTGACTGAAGCAATGATGCTTGAATCTAATAATATGTCATGGAGAAGGTCCTTAAATTTTGGCATGGGAACAATAGAGAAAAGTTATGCAGGCAGAGAAAATTTAGTTTTGCACATTGGCAAGGAAAATAATATTGTGTTAGAGGAAACAAAAGTTGGCCTTGCCTATAATCGAGACACTCGAATGAAGCAGGCATTAAATAATTACATGCCATTACCTGAAGAAATGCATGACCCAAGTAAATCCATTTCAACAATCAATCCCCTTGGGGCAAAGCTCAATGCAAACTCTGCAGAGAACAAACATAAAAGAAAAGGCCAGTTAACTACTCAGAATGGAAACATTAGTAATAGTCAAGTTTCAACAATAAGGTTGCAAATGGATGGTTCAAAGAGACAACACTCTGGTACCATTAAATGTGCAGATGATAGTGACATGAATCTGATTGGGGCACACTACAATGGATTGCCCACATACCAGACAAACTTTTGGGTTCAATTTCCAAACTTGCAGAAGAAAAGAAGAACTGAAAAGGGGAAGACTTCCAACACTTATGTTACATCTTCAGTGACTACTACAGAAGTCCAACCAACACACCCTCATGAAGATGCTCAAGTGCATCCATGTGCATCAAGCTCCAACTGCTGGATTTATAGTTCTGGATATAACACAGAACAAGTCCCAGCCATGTGTGAATCAACAGAAAATGTTATTGATAATTCTCAAACATTTGAAGAGTTCCTCTTGTCTTTGAGAAGACTGACAGAAAGATCTCAATCCCCTACTCAAATTTATGATTTTGGTTCTCTAACCAGAATTGGAAATTGTGATGCTGAGCCGAGTTATACTGCAAAACAACTAGGCCTGTCTGCCCAACAAAAATGCATTGATGCTTTGGTTCCAGAAACACGTACATCACTCACAAAAAAGAAGCGGAGTAGAAAGAAAGGTGCTCTTTCCAGTTCAGCATATTCTAGCACCAATGAGATGCAACAGCACCATAATTTTACAGGGGGAAATAACCACCTACCAGTGCCAATGGGCCAATCAATGGGTATTTCAACTGAATATATTTTGCATGAAGTTCTATGGAAAACCATCAACAACGTAGATGCATTAACAGAGCAATTTAGACAACTAACCATATATGCAGAAGCCAGAGATCTTGTCTTATATGAGCAGAATGCAGTTGTCCCTTATAACCAGCAAAATCAAAACAGCCTTATCCATGGAGACGGTGCCATTGTTCCCTTTCAGGGACCATTTGAACCCATCAAGAAACAGCATCCACGACCAAAAGTTGACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGATGTTAGATATAAACAGTCATGGGATTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAGAAGAACGAAAGGTGTTCCGTGGACGAGCAGACTCATTTATTGCACGAATGCATCTTGTACAAGGAGACAGGCGATTTTCTAGATGGAAAGGATCAGTTGTAGATTCAGTGGTTGGGGTTTTCCTCACTCAAAATGTCTCTGACCACCTTTCCAGCTCTGCATATATGTCCCTTGCTGCTCGATTTCCCAAACAATCAAGCAGCACGTCTGAAACATACCATGCAGAAGACATGAAGCTGGTAGTCAACAAACCACAAGTGCATATAGTGGAACCAGAAGAGAACACAGAATGGGATGTCAAATTATTGAATCAATCTGTTTATGACCAAAGTTCTATGACAGTAGATATAGTTGAGCATTCTGGAGAAAAAGCTGTCAACAGCAATGATTCCTGCAGAACTGTCAGCAGTGTAATTAGCTTAACAGATGAATCAAACTCCAGACTTTCAGAATCATCTCAAAGAAATATTAAGGAAAATTGTAGTCCAACAAGACGTGAACTACTTAGTGCTACAATTGAGGAAGAAGAAAAATCAGGTTACAATGGTGATGGGAAAGAGTTAAATGACATAGTTTCATCCCAATGCTTTGTTGTTTCATCTCAAATCTATGGAGATTTTTCAAATGATCAAAATCCTGAGAAGATAGGATCATGCTCAGATAGCAACTCAGAAATAGAAGATCTGTCCAGCTCAGCAAAGTACAACCATTTTGATAGCAGCACTTCCTTCTGTAAACTTCTAGAAATGGTTAGTTCAACCAGGTTTTATGATGATAACAGTCAAAAAAGCAGAAATGAGAGTTTAAGAGATACATATGATCAATCTATATGCATGCAACATGACAACCCTACAGAAAGCTTGAAAAAACCAAATGTTACTCCAGGCCCTTCAGAAGCATCAATCATCACATCCCATGGATGTACTTTTAAACTCACCCCCAGCTCAGGAGTGCTTGAAGATAATGGCTTTGATCCTTTCAAAACAGAACCCTCATCAAGTAGCATCTTAAAGAATAAAGATGAAAATGATATGAACAGACCAAGTTTTCAAACAGCAGAGCCTGCAGGTCAAGTTGCAGTTATCCATTCTCAAAGTATTGTATCTCAAGTCCATCCACAGGAACAAAGCAAACACGCGCAGCAAAGCTTTTTCAACAATGCTGGACAAGCTCAAGAACTTTTACAGAAAGAAAGGGGGTTAGATCTTGGTGACCACAAAAATGATGCGAGGAACGAAACCAATGAGATAAGTTCTGCCCCACTAAAATTAAAGAGCAGAGGACAAGGAAAGGAGAAAAAGGACGATTTTAAATGGGATAGTTTAAGAATAAAGGCACAAGCTAAGGCTGGGAAAAGAGAAAAGACAGAGAACACCATGGATTCCTTGGACTGGGATGCTGTGAGATGTGCAGATGTTAATGAAATTGCTAATACAATCAAAGAACGGGGCATGAACAACAGGCTTGCAGAACGTATTAAGAATTTTTTGAATCGATTGGTTGAAGAACATGGAAGCATTGACCTTGAATGGCTGAGAGATGTTCCACCTGACAAAGCAAAAGAATATTTGCTCAGCATAAAAGGATTGGGATTGAAAAGTGTGGAGTGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCAGTAGACACAAATGTTGGACGTATAGCAGTAAGACTGGGATGGGTACCTCTCCAACCCTTGCCTGAGTCACTACAGTTGCATCTCCTAGAACTGTACCCAGTGTTGGAGTCAATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGACCAAAGAACATTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCGAATTGTAATGCATGCCCTATGAGAGGAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCCCTGCCTGGACCAGAGCAGAAGAGTATAGTTAGCACAGCCAGAAATAGTGTGACTGATCATAACCCATCTGAAATCATCAGTTCGTTGCACTTGCCTCCCCCCGAGAACACAAGCCAAGCAGAAGAAATTCAACTAACAGAAGTGAGTAGGCAATTGGAATCAAAATCTGAAATAAATATCTGCCATCCTATCATTGAAGAGCCGACTACTCCAGAGCCAGAATGCTCTCAAATATCAGAAACTGATATAGAGGATGCCTTCTATGAGGATTCATGTGAAATTCCTACCATCAAGCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTATATGCAAGAAAATATGGAACTTCAAGAAGGTGAAATGTCAAAGGCTTTGGTTGCTTTGAATCAAGAAGCTGCCGCCATTCCTATGCCCAAGTTGAAAAATGTGAGCCGATTACGAACAGAACACTGGGTTTATGAACTCCCAGATATGCATCCTCTTCTTGACGGGTGGGACATGCGAGAGCCTGATGATCCAGGCAAATACCTTCTTGCTATATGGACGCCAGGTGAGACAGCAAATTCTATACAGCCACCTGAAAGCAAATGCAGCTCACAAGAATGTGGCCGACTCTGCAATGAGAAAGAATGTTTCTCGTGCAACAGTTTCCGCGAAGCAAATTCGCAGATAGTTAGAGGGACAATCCTGATACCATGTCGAACAGCTATGCGGGGAAGCTTTCCACTAAATGGAACTTATTTCCAAGTCAATGAGGTATTTGCTGACCACGACTCGAGTCTTAATCCAATCAGTGTTCCCCGAAGTTTGATCTGGAACCTCAATAGGCGAACAGTATATTTTGGAACCTCCGTCTCATCAATATTTAAAGGCTTATCAACACAAGAAATTCAACAATGCTTTTGGAGAGGGTATGTCTGCGTGCGAGGGTTTGACAGGAAATCGAGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCCAAGACCAAAGAGAAGACCAAAAAAGAGTCGAGTTCAGTGAAAACACAAGGATTGAAACCAAACACAGAATACCCAGAATTGATTTCGAACGGTAGCAACCTTCGGGAGACGGGAAGAGCCTGA 6741 0.4109 MEVGEMDRKEPQLEVPWIPTTPVKPGPPKPVPICTTGEGMGHHANGAVACAEFSLGEEKNCRSRDGSVANIAGDNGKTYKQTASDAVSIYGNPGFTEHLFTVVAESANSNVIQQEGNDGLKNPFIPSIITRDNSRDSQEISYIAWCSKRTSQDTSFTVDTNKVETRQIASMQITVEEKDPGGEEKNVPAKKFDNNVPPINKELCDPLTEFTSVSSPFKDNDNLDKGSSHDTDLNKTPQQKSRRRKHRPKVIKEDKPKRTRKPATPKAVQSKDNLTGKRRYVRRKGLNKTAASPAEVTGELAKEMPGSANISCRRSLNFDMGTKDGSSVDIENATLLGKENGVVVQQTDVGLANDLNSYMKQASNSHMSLPEDTQAPSTPSRKRSGTKTTENSTGKRKYVRRKGLNKTSTPPTEVTGVLTKEMPGSEKISCISLSFDIGTKDQSSADRENETALLGKENVVIQETDVGIANNLSIANNLNSSMKLASNCHMSLPEDTQAPNTSTSRKSSGTKTMENSTGKRKYVRTKQLNKTSPTGVTGELTKEMPGSVKMSFVSSLNFDIETKYQSSADLENATVLLSKENGAVIKETVGLAYDLNSSMKQASNSHMSLPEDTQSPNTSSRKRSGTKTQENSTGKRKYVRRKVVNKTSPTEVTGEQTKEKMPESAQMSSIGSVNFDERARDQSSAVKECVTVHSGNEIGEVMWEMKQVPYDTQFPSTSSKINLPGAKTENPTGKRKNVRKRGLTNAAPIPPTEMKDLTEAMMLESNNMSWRRSLNFGMGTIEKSYAGRENLVLHIGKENNIVLEETKVGLAYNRDTRMKQALNNYMPLPEEMHDPSKSISTINPLGAKLNANSAENKHKRKGQLTTQNGNISNSQVSTIRLQMDGSKRQHSGTIKCADDSDMNLIGAHYNGLPTYQTNFWVQFPNLQKKRRTEKGKTSNTYVTSSVTTTEVQPTHPHEDAQVHPCASSSNCWIYSSGYNTEQVPAMCESTENVIDNSQTFEEFLLSLRRLTERSQSPTQIYDFGSLTRIGNCDAEPSYTAKQLGLSAQQKCIDALVPETRTSLTKKKRSRKKGALSSSAYSSTNEMQQHHNFTGGNNHLPVPMGQSMGISTEYILHEVLWKTINNVDALTEQFRQLTIYAEARDLVLYEQNAVVPYNQQNQNSLIHGDGAIVPFQGPFEPIKKQHPRPKVDLDDETDRVWKLLMLDINSHGIDGTDEDKAKWWEEERKVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAYMSLAARFPKQSSSTSETYHAEDMKLVVNKPQVHIVEPEENTEWDVKLLNQSVYDQSSMTVDIVEHSGEKAVNSNDSCRTVSSVISLTDESNSRLSESSQRNIKENCSPTRRELLSATIEEEEKSGYNGDGKELNDIVSSQCFVVSSQIYGDFSNDQNPEKIGSCSDSNSEIEDLSSSAKYNHFDSSTSFCKLLEMVSSTRFYDDNSQKSRNESLRDTYDQSICMQHDNPTESLKKPNVTPGPSEASIITSHGCTFKLTPSSGVLEDNGFDPFKTEPSSSSILKNKDENDMNRPSFQTAEPAGQVAVIHSQSIVSQVHPQEQSKHAQQSFFNNAGQAQELLQKERGLDLGDHKNDARNETNEISSAPLKLKSRGQGKEKKDDFKWDSLRIKAQAKAGKREKTENTMDSLDWDAVRCADVNEIANTIKERGMNNRLAERIKNFLNRLVEEHGSIDLEWLRDVPPDKAKEYLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKSIVSTARNSVTDHNPSEIISSLHLPPPENTSQAEEIQLTEVSRQLESKSEINICHPIIEEPTTPEPECSQISETDIEDAFYEDSCEIPTIKLNIEEFTLNLQNYMQENMELQEGEMSKALVALNQEAAAIPMPKLKNVSRLRTEHWVYELPDMHPLLDGWDMREPDDPGKYLLAIWTPGETANSIQPPESKCSSQECGRLCNEKECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSLIWNLNRRTVYFGTSVSSIFKGLSTQEIQQCFWRGYVCVRGFDRKSRAPRPLMARLHFPASKLAKTKEKTKKESSSVKTQGLKPNTEYPELISNGSNLRETGRA* 2247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0585 2246 CDD ENDO3c 1688 1806 IPR003265 GO:0006284
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 624 684 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 720 1594 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1626 2213 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 268 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 269 382 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 385 469 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 502 619 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr8g0585 2246 MobiDBLite consensus disorder prediction 239 254 - -
Apr8g0585 2246 Coils Coil 1972 1992 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 930 961 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 1627 1660 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 937 955 - -
Apr8g0585 2246 Pfam Permuted single zf-CXXC unit 2066 2097 IPR028924 -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 222 238 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 2206 2246 - -
Apr8g0585 2246 SUPERFAMILY DNA-glycosylase 1232 1863 IPR011257 GO:0003824|GO:0006281
Apr8g0585 2246 MobiDBLite consensus disorder prediction 601 669 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 1545 1567 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 362 387 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 213 277 - -
Apr8g0585 2246 SMART ccc3 1841 1861 IPR003651 GO:0051539
Apr8g0585 2246 Gene3D - 1770 1858 IPR023170 -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 1626 2213 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 720 1594 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 1 268 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 385 469 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 624 684 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 502 619 - -
Apr8g0585 2246 PANTHER ROS1, PUTATIVE-RELATED 269 382 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 362 421 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 715 739 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 646 669 - -
Apr8g0585 2246 Gene3D Hypothetical protein; domain 2 1683 1769 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 1074 1099 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 601 627 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 491 516 - -
Apr8g0585 2246 Pfam RRM in Demeter 2100 2200 IPR028925 -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 2219 2246 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 1062 1099 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 491 522 - -
Apr8g0585 2246 MobiDBLite consensus disorder prediction 173 199 - -
Apr8g0585 2246 SMART endo3end 1668 1840 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0585 Apr-Chr8 5255198 5265965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0585 - - aprc:113870890 4372.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0585 8 5255198 5265965 Apr8g0585 8 5255198 5265965 ECH
Apr4g0285 4 2370513 2379568 Apr8g0585 8 5255198 5265965 PCT