Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0285 ATGGAGGTTGGAGAAGCAGATAGAGAAAAGCTTCAGGTACAGGTTCCTTGGATCCCCACCACCCCTTTGAAGCCCATTCTTCCAAGACCAGGGCCGATCTTGGTTCACGGGGAGGGAAACCAGCTGGGCTCTCATTCCAATGAGGTACCTGCATGTTGGGAATCTTCAGCCTGTGCAGAGATAAGAGGCAGGCTTCACTATCGTTCAGAACCTCCGGCTGAAGCCTATGACAAAGCCGAAAGTTGCGTACGAAAGTCCTTCGGCCATATTTCCAGCCCAAGTAATGGCATTGCCGAACTTTTGGCTCAGGCGGATGCTCCATCGACGTATTCTATTGCAACACATGACGTGTGTTTGAAGAACCAATTTATTCCTACTTTTAAAACACAGTTCAATCCGACCTATGCATTACATAGCCACCATCATCTCTCTCGCGGGCAACCCGTGATCAATACAATCCATGACAAGTACCAAGATGTTCAGGGCACACCGTACTTTGCTTACTATAGCAAGACCACTCACATTGCCCCACCTACTCCAGATACTGCAACACCAATGAATAGGGAAGAAAGGGGTCAAGGTGTAGAAGAAAATGTCCCAGCCACAAAATACAATTATCCACACAAAGCTGCGGTTGCATCTACACCATGCAAGGAGAATCACAACCGCAATAAGGAACTAAGCCATGATATTGATCTGAATAAAGTACCTCAATCAAAAACAAAAAGAAAAAAGCACCGCCCCAAGGTCGTAATAGAAGGCAAACCCCAAAGAACTAGGAAGCCCGTCACCCCAAAGCCAGTTCAACCAAAAGAAAATCCAACTGGCACAAGAAAGTCCAGAAGGAAAGGATTGAACATGACTTCAACTCCTCAAACAGAGGTGAGAGAAGAATGGACTAAACCATTGATGCCTGAATCCACCATAAAGACATGTAGAAGGTCCATTAATTTTGACGTGGGAGAACAACCACCGAGAGATGACATTTCTACATGCAGAGAAATTGGTGTGGTGATTGAGGGAGCACAGGCTTTAAATAACTCCCTCTCAAAATCAGTAGCACAGTCAAGTCCAAAGGATTCCAACAGCAGTAACAGTGAAAGTTTGACCACAAGGTCAAGATTACATGTAAATGGTCCCAAGAGAAAACATTCCAGTACAATGGAACATGCAGCTAACAGCAGCATTAATCTGATCGGAGCACAGTATAATGCAGTGCAGGCGTACTGTCTGAAGAGTTGTGTTCAATTTCCAAATGTGCACAAGAAAAAAAGAACGGATAAGGGGAAATTTTCCTACACATCCAATACACCTTGCATGACAGCGACAAAAGATGTAGAAGTAGCAACATGCCCTCCAGAAGATGGTAAATCACATCCATCAAGTCGCAACTACCAGACTGCTGGTTCTGCATTCATCAGAGTCCCGGTGACAATTGAAGAGACAGAAAATATGCTTGATAAACCTCAATCATTAGGATTCAAGTTGTCTTCAGGGCAGAGGAGGTCAAGAGTCCCCGCCAGAATTCATGATTGCGCTTCATCAAACTTATTCAGAAGCTGTGATACCAAACTAGCACAGACTACAAAACAAGCGGGCAGTTCTGGCAGACAAACATTTGGGGTTGCAGAAAGACTGCAGACATGCGCTGATGCTTTATCTGCAGAGATGCAAGCATCGCTAACAAAAAAGAAACGAACTAAAAAGAGAACTATTCCTGTCAGTTCAGCATATTCTTGCACAGATGAAATGCAACAGCACAGTAAATTTGTGTTGGAAAATCAAGGCCAATATTTGCACAACTCATCAGATGCTGCTTCTGAAGAGATATGGAAAAACATACAAACTGTGGATGCTTTAACAGAGAGGTTTAGCCACCTAAGCATATGTAGAGAAGCCACAGAGCTTGTGCTGCATGAGCAGAATGCAATTGTCCCTTACGACCAGCAGAATGATAGTGGCACTATCATTCCCTTTAAGGGTCCACTTAATCCCATAAAAAAACAGCACCCACGACCTAAAGTTGACCTTGATGAGGACACTAATGGTGTGTGGAAGCTTCTGATGCTAGATATAAACAGTCATGGAATTGATGGAACAGATGAATTGAAGGCCAAATGGTGGGAAGAGGAAAGAAATGTGTTCCGTGGACGAGCAGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGCTTTTCAAAATGGAAGGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACTCAAAATGTCGCTGATCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCTCCAAGCAACAAGCACAAAACATACCACAAGGAAAGCAGAAGCTTGATAGTCACCGAACCACAAGTGCAAATTGTGGAACCAGAAGCAAATTCAACAGTGGATGAAAAAACATTGAATCAATCTGTTAATGAATTGGGTTCTATGCCAGTAGACATCATCAAGCATTCAGAAGACAGAGAAGCTGTTGACAGCAATGATTCCTGCAGAACTACTGGTGGCTTAATTAGCTTAACAGATGAATCAACTCAAAGACATATTAGAGAACATAGTCCAGTGGAGAGTGGACCAATTATTGCCGTGACTGAGGAAGGGCAAGAAAATCTATGTCATGGGGGCATTGGGAAAGCCTTAAATGATGTATTTTCATCCCAATGCTCTGCCGTTACATCTCAAATATCTGGAGATTGTTTCATTGATCAAAATCCTGAGAAGATACGATCATTCTCAGATAGCAACTCTACTGTAGAAGACAAGTCAAGCGCAGCCAAGCACAACCTTTTCAATAACAGAACATCTTTCAGCAAGCTTTTAGAAATGGCAAGTTCAACGATGTTGCATGAAGTTAACTGTCAGAGTGGCAAATCACTTGAGAATTTAAGAGACAAGTATGGTCAATCTTTAGGCATGAATATTGACAACTTGGCACAGAACTTGGAAAAATCAAATGTTTCTCAAGCTTCCTTAGAAGAATCAATCATCTCATGCAACGAATATACTTTGAAAATGACCCCAAACTCGGGACTACTTGAAGTTAATTGCTATGATCCTCTCAAAATAGAAGTCCCATCAACTAGCTCCTCAAAGAACAAAGATGAAAATGACAAAAGAGTTAATTTTCCAACAACAGAATCTGACAGCCATACTGCAATTACCCAGTCTCAAGGACAAACTCAAGATACTAAGAAGAAAGCAAGGGAAATCAAAAAGAGCAAGAAAGGGTCTAGCTCTGTTAAACAAAAAAGAAGGAAGCGTGGAAAAAAGAAAAAGGCTAAATTTAATTGGGATAGTTTAAGAATACAAGCTCAAGCTACGGCAGGAAAGAGAGAAAAGACAGAAAACACCATGGACTCTTTGGACTGGGATGCTGTGAGACGTGCAGATGTCAACGAAATTGCTGATATAATCAAAGAAAGGGGCATGAACAATATGCTTGCTGAACGTATTAAGAATTTCCTGAACCTATTGGTTGATGTACATGGGGCCATTGATCTTGAGTGGTTGAGAGATGTTCCACCTGATAAAGCAAAAGAATACTTGCTCAGCGTGAAGGGATTGGGATTGAAAAGTGTAGAGTGCGTAAGACTCTTAACATTGCACCACCTTGCTTTTCCGGTGGATACAAATGTCGGACGGATAGCTGTACGACTGGGATGGGTACCGCTTCAGCCACTGCCCGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGAATCCATACAAAAATATCTCTGGCCCCGGCTCTGCAAGCTAGACCAAAGAACATTGTATGAGCTGCACTACCAACTGATTACATTTGGAAAGGTCTTTTGTACTAAAAGCAAACCAAATTGCAATGCATGCCCAATGAGAGGAGAATGCAGACACTTTGCAAGTGCTTTCGCAAGTGCAAGGCTTACTCTGCCAGGACCAGAGCAGAAGAGTATAACCATCACAACAGGAAAGAATGCAACTTATCAGAACCCATCAGTAGTTATCAGTCAGGTACCCTTCCCTCTACTTGAAAACACAAACCAAGCAGAAGAACTTCAACAAACCGAAGGGATCCAGCAACTAGAAGCAAAATCTGAAATCAATATCTGCCAACCTATTATTGAAGAACCAGCAAGTCCAGAGCCAGGATGCTCCCAAGTATCAGAAAATGATATAGAGGATGCCTGCTATGAGGAGTCATGCAAAATTCCCACCATCAAACTAGACATAGAAGAGTTCACTTTGAATTTACAAAATTACATGCAACAAAACATGGAACTTCAAGAAGGGGAAATGTCGAAGGCCATGGTTGCTCTAGATCCAGATGCTGCACGTATTCCTATGCCAAAGCTGAAGAATGCGAGCAGACTGCGTACAGAGCATTATGTTTATGAACTCCCAGATTCACATTGTCTTTTGGAAGGGTGGGACAAGCGAGAACCTGATGATCCAGGCACATACCTTCTAGCTATATGGACTCCAGGGGAGACTGCACATTCTATACAGCCACCAGAAAGAAAATGCAGCTCTCAGGACAGCGGCCAGCTTTGTAATGAGAAGGAGTGCTTTTCATGCAACAGTTTCCGTGAAGCAAATTCGCAAATAGTTAGAGGGACAATCCTGATACCATGTCGAACAGCCATGAGAGGGAGCTTTCCACTAAATGGCACCTATTTCCAAGTCAATGAAGTTTTTGCAGACCATGACTCGAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTCAATAGGCGAACAGTATATTTTGGAACTTCCGTATCAACAATATTTAAAGGTTTGTCCACACGTGATATTCAACAATGCTTTTGGAAAGGATATGTCTGTTTGCGAGGATTTGACAGGGAAACGCGAGCACCCCGTCCTCTAATGGCTAGACTACATTTCCCTGCTAGCAAGTCGACTAAGAAGAAGGACAAGACCGTTTTCCCATCTAGCAAGTTGCCTGAGAAGGACGAGACCAAAAAACGGTCGACATCAGCAAACCCAAAAGGATCATACTTTAAAGCGAAAGCTAAAATTACTTTCGAAGATTCATAG 5082 0.4278 MEVGEADREKLQVQVPWIPTTPLKPILPRPGPILVHGEGNQLGSHSNEVPACWESSACAEIRGRLHYRSEPPAEAYDKAESCVRKSFGHISSPSNGIAELLAQADAPSTYSIATHDVCLKNQFIPTFKTQFNPTYALHSHHHLSRGQPVINTIHDKYQDVQGTPYFAYYSKTTHIAPPTPDTATPMNREERGQGVEENVPATKYNYPHKAAVASTPCKENHNRNKELSHDIDLNKVPQSKTKRKKHRPKVVIEGKPQRTRKPVTPKPVQPKENPTGTRKSRRKGLNMTSTPQTEVREEWTKPLMPESTIKTCRRSINFDVGEQPPRDDISTCREIGVVIEGAQALNNSLSKSVAQSSPKDSNSSNSESLTTRSRLHVNGPKRKHSSTMEHAANSSINLIGAQYNAVQAYCLKSCVQFPNVHKKKRTDKGKFSYTSNTPCMTATKDVEVATCPPEDGKSHPSSRNYQTAGSAFIRVPVTIEETENMLDKPQSLGFKLSSGQRRSRVPARIHDCASSNLFRSCDTKLAQTTKQAGSSGRQTFGVAERLQTCADALSAEMQASLTKKKRTKKRTIPVSSAYSCTDEMQQHSKFVLENQGQYLHNSSDAASEEIWKNIQTVDALTERFSHLSICREATELVLHEQNAIVPYDQQNDSGTIIPFKGPLNPIKKQHPRPKVDLDEDTNGVWKLLMLDINSHGIDGTDELKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSKWKGSVVDSVVGVFLTQNVADHLSSSAFMSLAARFPPSNKHKTYHKESRSLIVTEPQVQIVEPEANSTVDEKTLNQSVNELGSMPVDIIKHSEDREAVDSNDSCRTTGGLISLTDESTQRHIREHSPVESGPIIAVTEEGQENLCHGGIGKALNDVFSSQCSAVTSQISGDCFIDQNPEKIRSFSDSNSTVEDKSSAAKHNLFNNRTSFSKLLEMASSTMLHEVNCQSGKSLENLRDKYGQSLGMNIDNLAQNLEKSNVSQASLEESIISCNEYTLKMTPNSGLLEVNCYDPLKIEVPSTSSSKNKDENDKRVNFPTTESDSHTAITQSQGQTQDTKKKAREIKKSKKGSSSVKQKRRKRGKKKKAKFNWDSLRIQAQATAGKREKTENTMDSLDWDAVRRADVNEIADIIKERGMNNMLAERIKNFLNLLVDVHGAIDLEWLRDVPPDKAKEYLLSVKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLTLPGPEQKSITITTGKNATYQNPSVVISQVPFPLLENTNQAEELQQTEGIQQLEAKSEINICQPIIEEPASPEPGCSQVSENDIEDACYEESCKIPTIKLDIEEFTLNLQNYMQQNMELQEGEMSKAMVALDPDAARIPMPKLKNASRLRTEHYVYELPDSHCLLEGWDKREPDDPGTYLLAIWTPGETAHSIQPPERKCSSQDSGQLCNEKECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSVSTIFKGLSTRDIQQCFWKGYVCLRGFDRETRAPRPLMARLHFPASKSTKKKDKTVFPSSKLPEKDETKKRSTSANPKGSYFKAKAKITFEDS* 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1033 1103 - -
Apr4g0285 1693 Pfam RRM in Demeter 1543 1643 IPR028925 -
Apr4g0285 1693 Gene3D Hypothetical protein; domain 2 1111 1212 - -
Apr4g0285 1693 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 355 1061 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr4g0285 1693 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 271 336 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr4g0285 1693 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1075 1654 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr4g0285 1693 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 269 IPR044811 GO:0019104|GO:0035514|GO:0080111
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1646 1673 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1077 1103 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1037 1053 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 349 375 - -
Apr4g0285 1693 SMART ccc3 1284 1304 IPR003651 GO:0051539
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1644 1680 - -
Apr4g0285 1693 PANTHER ROS1, PUTATIVE-RELATED 1075 1654 - -
Apr4g0285 1693 PANTHER ROS1, PUTATIVE-RELATED 1 269 - -
Apr4g0285 1693 PANTHER ROS1, PUTATIVE-RELATED 271 336 - -
Apr4g0285 1693 PANTHER ROS1, PUTATIVE-RELATED 355 1061 - -
Apr4g0285 1693 SMART endo3end 1111 1283 IPR003265 GO:0006284
Apr4g0285 1693 MobiDBLite consensus disorder prediction 270 296 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 349 389 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 1054 1070 - -
Apr4g0285 1693 MobiDBLite consensus disorder prediction 219 238 - -
Apr4g0285 1693 Gene3D - 1213 1301 IPR023170 -
Apr4g0285 1693 CDD ENDO3c 1131 1249 IPR003265 GO:0006284
Apr4g0285 1693 Coils Coil 1415 1435 - -
Apr4g0285 1693 Pfam Permuted single zf-CXXC unit 1509 1540 IPR028924 -
Apr4g0285 1693 SUPERFAMILY DNA-glycosylase 717 1306 IPR011257 GO:0003824|GO:0006281
Apr4g0285 1693 MobiDBLite consensus disorder prediction 212 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0285 Apr-Chr4 2370513 2379568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0285 - - gmx:100787368 2189.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0285 4 2370513 2379568 Apr4g0285 4 2370513 2379568 ECH
Apr4g0285 4 2370513 2379568 Apr8g0585 8 5255198 5265965 PCT