Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr8g0568 | ATGGCATCAAGGCAACCACAGCAGGAACGAGCTGAAGCAGCAGCAAAACTTGCTGCAAGGGATCTTGAGGAAGTTAACAGAGAAAGAGAGCGTAATTTGGGAGCTGAGGACCAACAACAACTGGACCAACAGAAGCGCGGTGTAATTGGGTCGGTCCTAAGGGCCGTGCAAGACACCTACGAGAATGCTAAGGAAGCTGTTGTTGGCAAAAAGGAACCTGCGGATTCGTGTACTACAGAGGTTGTTCATCATGTCAATGTTGATAATGATTGTGTAGGAACTGGGGAAGTGAGAGACATATCAGCAAACAAGTCTCCTGGAATCTATGATTCTGCCACAGGAAAGGCCAAGGAAGCCAAAGACCAAGCAGGTTCAAAGGTTGGAGAATACACTGACTACGCGTCTCAGAAGGCCAAGGAAACAAAAGATGCAACAAAGAAAAAAGCGGGAGAGTACACTGATTACGCGTCTCAGAAGGCTAAGGAAGCTAAGGACAAGACAATGGAGAAGGGTGGAGAGTACAAGGACTATGCAGCTGAGAAAGCAAAGGAGGGAAAGGACGCTACAATGAACAAGATGGGTGAGTATAAGGATTACACTGCTGAGAAGACAAAAGAAGGGAAGGATGCTACGATGGGGAAGCTTGGAGAGTTAAAGGATTCAGCTGCTGATGCGGCTAAAAGGGCTATGGGTTACTTGGGTGCCAAGAAAGACGAAACCAAAGATAAGGCTTCAGAGACTGCGGAAGCAACGAAGAACAAAACTGCAGAGGCCACTGAGGCTGCGAAGAACAAGGCTACTGAGCTGAAGGATGCGGCTAAGGACAAGGCTGCAGAGACTACTGAGGCAGCCAAGCAGAAAACTGCAAAGGCAAAGGAGAACCCCAAGGAGAATGTGGGTGGAGCAGGTGAAGAAGCTACTAGGAGGAAAATGGAAGAACTGAGAATGCAAGGTAAAGGATACGGGGATGACGATGCAAAGGGTGGAGATAAAGTTGTCTTGAAAGTGGAAGAGAGTCGGCCGGGGGCGGTGGCGGAAACGCTGAAAGCGGCGGATCAGATGACGGGTCAGACATTCAACGATGTGGGACGGTTTGATGAAGAAGGGGACGTCAATGTGGAGCGCCGTAATAAATAA | 1137 | 0.4881 | MASRQPQQERAEAAAKLAARDLEEVNRERERNLGAEDQQQLDQQKRGVIGSVLRAVQDTYENAKEAVVGKKEPADSCTTEVVHHVNVDNDCVGTGEVRDISANKSPGIYDSATGKAKEAKDQAGSKVGEYTDYASQKAKETKDATKKKAGEYTDYASQKAKEAKDKTMEKGGEYKDYAAEKAKEGKDATMNKMGEYKDYTAEKTKEGKDATMGKLGELKDSAADAAKRAMGYLGAKKDETKDKASETAEATKNKTAEATEAAKNKATELKDAAKDKAAETTEAAKQKTAKAKENPKENVGGAGEEATRRKMEELRMQGKGYGDDDAKGGDKVVLKVEESRPGAVAETLKAADQMTGQTFNDVGRFDEEGDVNVERRNK* | 379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 256 | 328 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 133 | 169 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 232 | 250 | - | - | |
| Apr8g0568 | 378 | Coils | Coil | 256 | 290 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 363 | 378 | - | - | |
| Apr8g0568 | 378 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 150 | 373 | - | - | |
| Apr8g0568 | 378 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 1 | 168 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 232 | 328 | - | - | |
| Apr8g0568 | 378 | Coils | Coil | 8 | 28 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 359 | 378 | - | - | |
| Apr8g0568 | 378 | MobiDBLite | consensus disorder prediction | 91 | 169 | - | - | |
| Apr8g0568 | 378 | Pfam | Late embryogenesis abundant protein | 110 | 152 | IPR004238 | - | |
| Apr8g0568 | 378 | Pfam | Late embryogenesis abundant protein | 197 | 228 | IPR004238 | - | |
| Apr8g0568 | 378 | Pfam | Late embryogenesis abundant protein | 153 | 196 | IPR004238 | - | |
| Apr8g0568 | 378 | Gene3D | - | 155 | 198 | - | - | |
| Apr8g0568 | 378 | Gene3D | - | 96 | 154 | - | - | |
| Apr8g0568 | 378 | Gene3D | - | 199 | 251 | - | - | |
| Apr8g0568 | 378 | PANTHER | DAUER UP-REGULATED-RELATED | 150 | 373 | - | - | |
| Apr8g0568 | 378 | PANTHER | DAUER UP-REGULATED-RELATED | 1 | 168 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr8g0568 | Apr-Chr8 | 5068639 | 5069985 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr8g0568 | - | - | aprc:113873399 | 599.356 |
Event-related genes