Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0267 ATGGCGTCGAGGCAACAATTCAAGGAAGACAGAGCTGAAGCAGCCGCGAAGCTTGCTGCGAAAGACATTGGAGATATCAACAGAGCAAATGAACGTGAAGAGGGATATACACTGCACTCCGATGCTCACTTCAAGCAAGCACGAGCTGAAGCAGCTGCAAAGCTTGCTGCTAAGGATCTTGAAGACGTTAATAGAGCAAGAGAGAGTGCAATGCAAGAACAACGTGAGGATGAACAGCAAAAACCCAGTGTGATAGGGTCCATGTTTAGAGCAGCCAAGGAAGCTGTGGTTGGCAAGCCTCAGGAGGGTGCGGAAGTGAGAGATAGATCGGTTGAAAACCCACCTGGGGTTTATGATTCTACCTGGGAAAAGACCAAGGAAACGAAGGATGCAGCGAAACAAAAGGCTGAGGAGTATGCAGATTATGCATCTCAGAAAGCAAAAGAAACCAAGGACAAGACGATGGACAAGGCTGGGGAGTACAAGGATTATGCTGCAGATAAGGCTAAGGAAGCTAAAGATGCTACAGTGCAAAAAGCTGGAGAGTACAAGGACTACACAGCTGAGAAGGCGAAAGAAGGAAAGGACAATGCAGTTGGGAAGCTTGGGGAGCTGAAGGATTCTGCTGCTGATGCTGCCAAAAAGGCTATGGGTCTCTTCACTGGCAGGAAAGAGGAAGCAATGGAGAAGACGAAGGAAAAAGTGAGTGGAACAGAGGAAGTGAGGGACTACGGAGGTGGGCGCGGTAGAGATAAGATGGTGATCGAAGTGGAAGAGTCTCGGCCAGGAGCGATGGCGGATACGCTGAAGGTAGCAGAGCAGGTTATGAGCGATGTGGGACGCTTCGATGATGAAGGAGTTGTTCATGTGGAGCGTCGTCGGGAGAAAATGTGA 894 0.4944 MASRQQFKEDRAEAAAKLAAKDIGDINRANEREEGYTLHSDAHFKQARAEAAAKLAAKDLEDVNRARESAMQEQREDEQQKPSVIGSMFRAAKEAVVGKPQEGAEVRDRSVENPPGVYDSTWEKTKETKDAAKQKAEEYADYASQKAKETKDKTMDKAGEYKDYAADKAKEAKDATVQKAGEYKDYTAEKAKEGKDNAVGKLGELKDSAADAAKKAMGLFTGRKEEAMEKTKEKVSGTEEVRDYGGGRGRDKMVIEVEESRPGAMADTLKVAEQVMSDVGRFDDEGVVHVERRREKM* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0267 297 Pfam Late embryogenesis abundant protein 162 205 IPR004238 -
Apr4g0267 297 Pfam Late embryogenesis abundant protein 119 161 IPR004238 -
Apr4g0267 297 Gene3D - 115 163 - -
Apr4g0267 297 Gene3D - 164 222 - -
Apr4g0267 297 MobiDBLite consensus disorder prediction 225 252 - -
Apr4g0267 297 MobiDBLite consensus disorder prediction 122 154 - -
Apr4g0267 297 PANTHER - 44 186 - -
Apr4g0267 297 PANTHER - 171 240 - -
Apr4g0267 297 PANTHER - 1 35 - -
Apr4g0267 297 MobiDBLite consensus disorder prediction 63 80 - -
Apr4g0267 297 Coils Coil 53 80 - -
Apr4g0267 297 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 44 186 - -
Apr4g0267 297 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 35 - -
Apr4g0267 297 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 171 240 - -
Apr4g0267 297 MobiDBLite consensus disorder prediction 63 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0267 Apr-Chr4 2241688 2242669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0267 - - mtr:MTR_7g103280 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0267 4 2241688 2242669 Apr4g0267 4 2241688 2242669 ECH
Apr4g0267 4 2241688 2242669 Apr8g0568 8 5068639 5069985 PCT