LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr8g0566	ATGGAAAGTGCAGCATTGAAGCCAGTAATTCTCAAAGCTGGTGTTCCCTTGGCTGTATCTTTGGCTGGTTTGATCTATGCATGGATCATAGCAAAAAAAAGCTTATCTTCTAAATTCTCTTCTTTATCAGAAAATGAGGTTGATTCTCCTGAAACAAGTTGTCATCAGGGAACAAAACATGATGAAAACTTTGACACCCTTTCTTCTATGGACGATGAAGAAGCATCTACTCCAATGAATAGTAGTGTTCTTTCCGGGAGCTTGGTGATCCATGATAATAACCCATGTTTGGAACAAGAGATTACAAGCCTAAGAAGCCAAATTGAAGGCCTTCAAATGAGAGAATTGGCCTTGCGTTTGCAGTTTGAGCTGTATTGTGAAATGAAAGAACAAGAATCTCTACTTGTGGAAATCAAAAGCATGTTGTCATTGGAGAGTGCTCGTGTTGAATTGTTGGATAGAGAGATTTCATCCATAGAGACTGAGACTATGAGGTTGGAGAATTTTGTAGTTCAATATCTGAGGGTTGTCGAACAGCTTGAGTATTTGAAATCAGAGAATAGGGTGCTTCAGAGGAGGGTTCAGAAGATTCTTAGGAAATCAAAGGCCAAATCCCAAGTGATAAAGGATCAAACTTTGAAGATCAAAGAAAAAGAAAGAGAAATCTTGAGAAACCATGAGGCCTTGGAAGTTATTAATAAGTTAGAGGATGAGATCAGAGAGCTACACAGTGTTTTGGATCAATTGAAAGATGAGAAGAATGAACTTCTGAAGAGGCTTGACACAGCAGAAGCATATGCATCTAAGTTATACAATGAAAAGATACATAGAAAACCATTGAAATACTATTTGCAAGATGAACCTGGAGATGTAAGTAAGGAAGATTACAACAAGGTTCTCAATGAATTGGAGCATGTCAAGAAGGAACGTGCAACTGAAGTTGAAGAACTGAGTCACTTGAGGAGGACCAATGTTTGCTTAAGGCAAGAGTTAATGAGGCACCATGAACAGCAACAGCAACAACAGGATCAGAATAGAGACCATATTGAGGTGGAGTTTGAAGGTAGTGGAGGAATTATGCACTATGAGTCGGAACATGAGTTACATTATTCCCCTTCGCAGCATCACAATGTGTCTTGCATTGGTTCGGCTCGTCGCGATCGTACTTCTTCCAAAAGGAAAAGGATGCTTAGAAGGCTGAAGAGGTGGGTGGAAGGAAGTGAAAAGGTAAGAGTGAAGCATGAAATTAAGTGTCTAGATAGGCCTTCTGTCTCCTATGGATCAAAGAAATATGAAGTTCCAACATATGCAAGGTTCTGCTCTAGTGCATGA	1332	0.3964	MESAALKPVILKAGVPLAVSLAGLIYAWIIAKKSLSSKFSSLSENEVDSPETSCHQGTKHDENFDTLSSMDDEEASTPMNSSVLSGSLVIHDNNPCLEQEITSLRSQIEGLQMRELALRLQFELYCEMKEQESLLVEIKSMLSLESARVELLDREISSIETETMRLENFVVQYLRVVEQLEYLKSENRVLQRRVQKILRKSKAKSQVIKDQTLKIKEKEREILRNHEALEVINKLEDEIRELHSVLDQLKDEKNELLKRLDTAEAYASKLYNEKIHRKPLKYYLQDEPGDVSKEDYNKVLNELEHVKKERATEVEELSHLRRTNVCLRQELMRHHEQQQQQQDQNRDHIEVEFEGSGGIMHYESEHELHYSPSQHHNVSCIGSARRDRTSSKRKRMLRRLKRWVEGSEKVRVKHEIKCLDRPSVSYGSKKYEVPTYARFCSSA*	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr8g0566	443	Coils	Coil	180	200	-	-
	Apr8g0566	443	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	5	443	IPR040265	-
	Apr8g0566	443	MobiDBLite	consensus disorder prediction	370	393	-	-
	Apr8g0566	443	Coils	Coil	94	114	-	-
	Apr8g0566	443	PANTHER	CHUP1-LIKE PROTEIN	5	443	-	-
	Apr8g0566	443	MobiDBLite	consensus disorder prediction	46	80	-	-
	Apr8g0566	443	Coils	Coil	218	266	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr8g0566	Apr-Chr8	5044606	5046045	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr8g0566	-		-	gmx:100776941	549.666

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr8g0566	8	5044606	5046045	Apr8g0566	8	5044606	5046045	ECH
	Apr4g0263	4	2212677	2214737	Apr8g0566	8	5044606	5046045	PCT