Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0263 ATGGAAAACGCACCATCAAAGTCTCAAGTCCTAAAGCCAGTGATCCTCAAAGCTGGTGTTCCTTTGGCAGTGTCTTTTGCTGGTTTCATCTATGCTTGGATCATGGCTAAGAAAAGCATCTCTAAACCCACTTCTTTATCATCATCAAATGAAGCAAATTCTCATCAAGAGCCTCAACATGAAGAAAGTTGTCATAGCCTCTCTTATATGGAAGATGAAGAAGAACATAGTACCTCTGTGGATGCAAGTGTAGTTGCTGAGAGCTCAGTGATCCATGATACCCCATGTTTTGAAGAAGAGATTAAAGGCTTAAGAAGCAGAATTGAAGGCATGCAAATGAGGGAATTGGCCTTACGTTTGCAGTTTGATCATTATTGTGATATGAAAGAGCAAGAATCTCTTCTTGGAGAGATCAAAAACATGTTGTCACTTGAGACTGCTCGTGTTGACTTCTTGGATAGAGAGATTTCATCCATGGAGACAGAGAATAAGAGATTGGAAAGTTTTTCAGTTCAATATCTTAGAGTTATTGAACAGATTGAGAATTGGAAATCTGAGAATAGAATGCTTCGGAGGAAGTTTCAGAAGCTGCTGAGGAAATCTAAGGCACAAACCCGCCTTGCAAAGGAGCAGGCTTTGAAGATCAAAGTGGAAGAAGAAGAAATTTTGAGAAGCCATGATGCCTTGGAAACAAAAGTTAATGTCATAGGTAAACTAGAGGATAAAATGAAAGAGCTGCAAAGGGTGTTGGATCAATTGCAGGATGAGAAGAATGAACTTCTGAAGAAGCTTGATACAGCAGAAAAATCATATGCTTCTAAGGTAAGCAAAAGTTGAATGGCATCCTAATCATTACAATACAATGTTCCCCATTTGCAGATTGAAGCTGGAGATGTAAGTAGGGAAGAGTACAAACAGCTTTTGGATGAATTGGAGCAGATCAAGAAGGAAAGAGCAGATGAAGCTAAAGAACTCATTTACTTGAGGTGGACCAATGCTTGTTTAAGGCACGATCTAATGAGGAACCATGAACAACAACAGATTCAGGATAAAAATCATATAGAGTTGGAATTTGGAGGAAGCGATGACGTTATCCATTATGACTCAGAGCATGAGTTACACAATTCCCTTTTGGAGCATCACAGTGATCCTTCGTTTGATGAGCATCCTAGTGCTCATGATCATAGTGACAGTGCTTGTTCAAAAAGAAAAAAGTTTCTTGAAAGACTAAAGAGATGGGTGGAAGGCAGTGAAAAGGCAAGGATTAGGCCTTCTCTTTCCAAAGGGGCAGAGGAACATCTAGTTCCTAGGAGGAGGTCATGCTCTAGTGCTTATTGA 1338 0.3984 MENAPSKSQVLKPVILKAGVPLAVSFAGFIYAWIMAKKSISKPTSLSSSNEANSHQEPQHEESCHSLSYMEDEEEHSTSVDASVVAESSVIHDTPCFEEEIKGLRSRIEGMQMRELALRLQFDHYCDMKEQESLLGEIKNMLSLETARVDFLDREISSMETENKRLESFSVQYLRVIEQIENWKSENRMLRRKFQKLLRKSKAQTRLAKEQALKIKVEEEEILRSHDALETKVNVIGKLEDKMKELQRVLDQLQDEKNELLKKLDTAEKSYASKVSKS*MAS*SLQYNVPHLQIEAGDVSREEYKQLLDELEQIKKERADEAKELIYLRWTNACLRHDLMRNHEQQQIQDKNHIELEFGGSDDVIHYDSEHELHNSLLEHHSDPSFDEHPSAHDHSDSACSKRKKFLERLKRWVEGSEKARIRPSLSKGAEEHLVPRRRSCSSAY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0263 443 MobiDBLite consensus disorder prediction 44 72 - -
Apr4g0263 443 Coils Coil 229 270 - -
Apr4g0263 443 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 442 IPR040265 -
Apr4g0263 443 Coils Coil 295 322 - -
Apr4g0263 443 Coils Coil 173 220 - -
Apr4g0263 443 MobiDBLite consensus disorder prediction 55 72 - -
Apr4g0263 443 MobiDBLite consensus disorder prediction 378 398 - -
Apr4g0263 443 PANTHER CHUP1-LIKE PROTEIN 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0263 Apr-Chr4 2212677 2214737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0263 - - gmx:100805210 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0263 4 2212677 2214737 Apr4g0263 4 2212677 2214737 ECH
Apr4g0263 4 2212677 2214737 Apr8g0566 8 5044606 5046045 PCT