Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0558 ATGTCCACTAGATTTCGAGGATCACAAGAACACCAACATGGTTCTTCTTCCACCAGCGACACTTCACATGTTCCCCCAGCTCAAGCTGCTCGATTTATTGCTATTTTCAAGGATAAAAGTGTTGATGAGTTGCGGAAGCTTATATCTGACAAAGACTCGTATCAGGAGTTGTTGCGTTCACTTGATGACTTCAAGATTCAAAATAAGCTGAAAGATGAACTTTGCAAGGAGAATATGAAGCTTGTCGAGGAAAATCTACAAAAGGAACCTCGTATTGTGGAACTCAGGAACCAGTGTAGAATAATTTGGACGACTGAGTTAGCTGCTGCTCAAGAGAAATTAAACGAGCTTGAGAAGCAGAAAGATGAAATGTTGAAGTTGAATTCCCCAGTATCCCTTTTCCAAAAGATTCAAGAGGCTATGAATAAGACAGAAGAGGAATCTGAAAATCTTCACCAGCAAGTCCTTGACAGAGAGATTGACCTTGGAGCTTTCTTACAGAAATACAAGAAGCTGCGTACCGCTTACCACAGGAGAAGTCTCAGACATCTTGCAGCTAAAACATCAAATATATGA 576 0.4062 MSTRFRGSQEHQHGSSSTSDTSHVPPAQAARFIAIFKDKSVDELRKLISDKDSYQELLRSLDDFKIQNKLKDELCKENMKLVEENLQKEPRIVELRNQCRIIWTTELAAAQEKLNELEKQKDEMLKLNSPVSLFQKIQEAMNKTEEESENLHQQVLDREIDLGAFLQKYKKLRTAYHRRSLRHLAAKTSNI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0558 191 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g0558 191 SUPERFAMILY Endosomal sorting complex assembly domain 132 179 IPR037202 -
Apr8g0558 191 Gene3D Helix hairpin bin 116 186 IPR029012 -
Apr8g0558 191 Coils Coil 134 154 - -
Apr8g0558 191 Pfam Modifier of rudimentary (Mod(r)) protein 37 182 IPR009851 -
Apr8g0558 191 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 15 191 - -
Apr8g0558 191 Coils Coil 100 127 - -
Apr8g0558 191 ProSiteProfiles VPS37 C-terminal domain profile. 111 191 IPR009851 -
Apr8g0558 191 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 15 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0558 Apr-Chr8 4972156 5000373 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0558 K12185 - gmx:100797771 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0558 8 4972156 5000373 Apr8g0558 8 4972156 5000373 ECH
Apr4g0256 4 2172550 2176705 Apr8g0558 8 4972156 5000373 PCT