Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0256 ATGTTCAGATTCTGGGGATCACAAGAGCAACAATCGCAGGATGGTTCTTCACAGTCACAATCGTGGTATCCGCCATCGGTGTTGAGTTCACCGAGTTCTTCGAGGCCTGCTACACCAACTGCTTCTTCTTCTTCTTCTTCACAGAGGCCTTCTTCACATGTTCCACCTTCTGAAGCCGCTGGAGTTATTGCTGTCTTGAAGGACAAGAGTGTTGATGAATTACGGAAGCTTTCATCTGACAAAGATGCGTATCAGCAATTTTTACATTCACTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAGGAAAATCTGCTGAAGGAACCACGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTAGCTGCTGCTAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGTTGAAGTTGAATTCCCCTGCATCCCTTCTCCAAAGGATTCAAGAGTCTGCGAACAAGACAGAAGAGGAATCTGAAAATCTGCACCAGCTTCTCCTTGACAGAGAGGCCGACCTTGGGGCTTTCTTGCAAAAGTACAAGAAGCTACGTACCACTTACCACAGGAAGACTCTCATACATCTTGCTGCTAAAACATCTACTATATGA 666 0.4324 MFRFWGSQEQQSQDGSSQSQSWYPPSVLSSPSSSRPATPTASSSSSSQRPSSHVPPSEAAGVIAVLKDKSVDELRKLSSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLLKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPASLLQRIQESANKTEEESENLHQLLLDREADLGAFLQKYKKLRTTYHRKTLIHLAAKTSTI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0256 221 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 221 - -
Apr4g0256 221 Coils Coil 164 184 - -
Apr4g0256 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Apr4g0256 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 210 IPR009851 -
Apr4g0256 221 MobiDBLite consensus disorder prediction 1 59 - -
Apr4g0256 221 Gene3D Helix hairpin bin 145 214 IPR029012 -
Apr4g0256 221 SUPERFAMILY Endosomal sorting complex assembly domain 159 209 IPR037202 -
Apr4g0256 221 Coils Coil 130 157 - -
Apr4g0256 221 MobiDBLite consensus disorder prediction 1 54 - -
Apr4g0256 221 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0256 Apr-Chr4 2172550 2176705 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0256 K12185 - gmx:100305851 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0256 4 2172550 2176705 Apr4g0256 4 2172550 2176705 ECH
Apr4g0256 4 2172550 2176705 Apr8g0558 8 4972156 5000373 PCT