Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0544 ATGTCTGGCCCTGTGGCCACAGTTGGTAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGACCATATATCTATCTCGACAAACGGTGAAGCTGGTCATTCCTCTGAAGTTGCTGGCTTTAGAGTAGGGGAACTTTTACTTCCTAATGGAGAATCATATTCTGGGTCCCTTCTTGGAAACATTCCAGAGGGTCAGGGTAAGTATGTATGGTCAAATGGTAGTGTATATGAGGGAGAGTGGAGACGGGGGATGAGAAATGGAATTGGGAAAATACAATGGCCTTCTGGAGTAGCGTACGAGGGTGAGTTCTCAGGTGGCTATATTCATGGTACAGGAACATATATTGTCCCTAATAATCTCACCTACAAAGGTCGGTGGCGATTGAATCTTAAACATGGGTTGGGTTACCAAGTTTATCCGAATGGAGATATCTTTGAAGGCTCTTGGATCCAAGGAACACCAGAGGGGCCAGGCAAGTATACCTGGGCCAATGGAAATGTATATTTGGGAAATATGAAAGGTGGGAGAATGTCAGGAAAAGGAACTCTCACCTGGGTGAATGGAGACTCATTCGAAGGAAGCTGGTTAAATGGTATGATGCATGGGCTTGGGGTATATACATGGAGTGATGGTGGCTGCTATGTTGGGACTTGGACCCGTGGTCTGAAAGATGGCAAAGGAACTTTCTATCCAAAAGATAGCTACCTTTCATCTGCACAAGAAATATATCTCAATGCATTGAGGAAAAGAGGGCTGTTGCCAGATTTGAGAAAACAGAATCCAGTGCATATTCATCATGCTGCTTCAGTTGATATGGGAAATGTCAAGGTTGGTGAGAGCCAGCGATCAAGTCGTGTTTCATCTGATAAGCTAGCCAAAGGGAACCTGTTAAATCTGGAACAGTCGCGCGGTGTGAATATTTCTCTTGAAAGGCGCTGGAGTCTTGAGGCATCTATTGAGAAAGTGATTGGGCATGATTCAAAATTAGGTTCAACAGATTCAATACTAGGAAATGGGGATAAAGAGGTTAATGCAAAGGTCCCCATCTTGGAACGGGAGTATATGCAAGGTGTGTTAATAAGTGAGTTAGTGTTAAATAATAGTTTTTCATCAATGTCTAGAAGGGCTAAACAGCTTCAAAAGAAACTTGCCAAAGAGATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACAGGAGCTATGATCTGATGCTTAGTTTGCAGCTTGGAATAAGGTATACTGTGGGAAAGATTACCCCAATACAAAGACGAGAAGTTAGAGCATCAGATTTTGGTCCCAGAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAGTCAGAGGATTTTAAATGGAAAGATTACTGCCCGATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGAAATGATGCACTGAGGGAACTATCTTCTCCTGGGAAAAGTGGTAGCGTCTTTTTCCTGTCTCAGGATGATCGATTCATGATTAAGACACTACGGAGATCTGAAGTAAAGTTCCGTTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAAGAGATACGATTTAAAAGGTTCATCTCTTGGACGCTCTTCAGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTGAATTACTGCTTTTACTTGGAACCATCTTGGCGGGAGTCTTTATTAAAGCAGATAGAGATTGACAGCAAATTCTTGGAATTACAGCACATAATGGATTACAGCCTCCTCCTAGGTGTTCATTATCGAGCTCCCCGGCAGTTGCGTCCTCTCACATCATACAACCAAAGTATAAGTGCAGATGGATTGGCAATGCTTGCTGAGGAAGACCCTCTCGAGGATGAAGTATCCAACTATCCGCAAGGCCTTGTTCTGGTCCCTCGTGGTGCAGATGATAATAGTGTTGTTGTAGGGTCACATATAAGGGGTAGCAGATTGCGAGCTTCAGCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCCAGACTACAAATCCAGCTAGGCGTGAACATGCCAGCTAGGGCAGAGCAGATTCCAGGAAAAGAGGAAGTGCAAATGTTCCATGAGGCTTACGATGTCGTACTTTACTTGGGTATAATTGACATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCATATAAATCTATCCAGTTTGATTCATTATCTATCTCGGCGGTGGACCCTACATTCTACTCACGTCGCTTCCTGGATTTTATTCAGAAAGTGTTCCCACCGAATGAAATGGCAGGATAA 2388 0.4259 MSGPVATVGNLDGALSCAERTKSLDAISEIDHISISTNGEAGHSSEVAGFRVGELLLPNGESYSGSLLGNIPEGQGKYVWSNGSVYEGEWRRGMRNGIGKIQWPSGVAYEGEFSGGYIHGTGTYIVPNNLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGRMSGKGTLTWVNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPKDSYLSSAQEIYLNALRKRGLLPDLRKQNPVHIHHAASVDMGNVKVGESQRSSRVSSDKLAKGNLLNLEQSRGVNISLERRWSLEASIEKVIGHDSKLGSTDSILGNGDKEVNAKVPILEREYMQGVLISELVLNNSFSSMSRRAKQLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKFRFVVMGNMFCTELRIHKRYDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLELQHIMDYSLLLGVHYRAPRQLRPLTSYNQSISADGLAMLAEEDPLEDEVSNYPQGLVLVPRGADDNSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEVQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSIQFDSLSISAVDPTFYSRRFLDFIQKVFPPNEMAG* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0544 795 CDD PIPKc_AtPIP5K_like 410 787 - -
Apr8g0544 795 Gene3D - 161 206 - -
Apr8g0544 795 PIRSF PIP5K_plant 532 792 IPR017163 GO:0005524|GO:0016308
Apr8g0544 795 PIRSF PIP5K_plant 8 534 IPR017163 GO:0005524|GO:0016308
Apr8g0544 795 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 396 544 IPR027484 -
Apr8g0544 795 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 407 788 IPR002498 GO:0016307|GO:0046488
Apr8g0544 795 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 533 791 - -
Apr8g0544 795 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 533 - -
Apr8g0544 795 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 533 791 IPR023610 -
Apr8g0544 795 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 533 IPR023610 -
Apr8g0544 795 Gene3D - 207 249 - -
Apr8g0544 795 Gene3D - 115 160 - -
Apr8g0544 795 Gene3D - 52 114 - -
Apr8g0544 795 SUPERFAMILY SAICAR synthase-like 406 788 - -
Apr8g0544 795 SMART PIPK_2 437 789 IPR002498 GO:0016307|GO:0046488
Apr8g0544 795 SMART morn 61 82 IPR003409 -
Apr8g0544 795 SMART morn 176 197 IPR003409 -
Apr8g0544 795 SMART morn 130 151 IPR003409 -
Apr8g0544 795 SMART morn 84 105 IPR003409 -
Apr8g0544 795 SMART morn 222 243 IPR003409 -
Apr8g0544 795 SMART morn 107 128 IPR003409 -
Apr8g0544 795 SMART morn 153 174 IPR003409 -
Apr8g0544 795 SMART morn 199 220 IPR003409 -
Apr8g0544 795 Gene3D - 545 788 - -
Apr8g0544 795 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 533 786 IPR002498 GO:0016307|GO:0046488
Apr8g0544 795 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 185 - -
Apr8g0544 795 Pfam MORN repeat 86 106 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 109 128 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 132 153 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 155 177 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 178 199 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 63 85 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 201 222 IPR003409 -
Apr8g0544 795 Pfam MORN repeat 224 240 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0544 Apr-Chr8 4805521 4815429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0544 10 791 Acyl Lipid Metabolism Gene Families AT3G09920 70.402 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0544 K00889 - gmx:100805371 1477.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0544 8 4805521 4815429 Apr8g0544 8 4805521 4815429 ECH
Apr4g0238 4 2009084 2016485 Apr8g0544 8 4805521 4815429 PCT