Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0238 ATGTCTGGCCCCGTGGCCATAGTTGATCATTCAAATGGAGGAGCACTTTCTTGTGCAGAGAGAACAAGATCTGTTGACGCCATTTCTGAATTAGATTTACTGGCAAACAGTGAAATTGATGGCTTTAGTAGTGTTGAACAACTCTTACTGTCTAACGGGGAATCATATTCTGGGTCCCTTTATGGCAATGTTTCTGAGGGTCATGGGAAGTACGTGTGGTTTGATGGTTGTGTATACGAGGGTGAGTGGAGGCGAGGGATGAGAAGTGGACATGGAAAATTAAGATGGCCTTCTGGAGCAGTGTATGAAGGTGAATTCTCTGGTGGCTATATCCATGGTAAGGGAACATATAAAGGTTCTGATAAATTGAAGTATAAAGGTAGGTGGAGGTTGAATGTTAAACATGGTTTGGGTTATCAAGTTTATCCTAATGGAGATATCTTTGAAGGGTCTTGGATACAAGGAACACCAGAGGGTCCTGGAAAGTATACATGGGCAAATGGAAATGTATATGTAGGGAATATGAAAGGTGGCACAATGTGGGGAAAAGGAACTCTTACTTGGATAAATGGTGATTCATATGAAGGAAGCTGGTTAAATGGCATGATGCATGGTTTTGGAGTTTACACTTGGAGTGATGGAGGGTGCTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTATCCAAAAGGTAGTCGTCTTCCATCTGTACAAGAAATTTACCTCAATGCCTTGAGAAAAAGAGGGTTGTTGCCAGATTTGAGAAAACAAAACCAGGTGCGAGATGTGAAGGTATCAGAAAACCAAAGATCAAGTCGTGTGCTTTCATCTGATAAGCTTGCAAAAGGAAACATGTTAAATTTGGAAGAGTCTAGGGGAAGAAATGTGTCTCTTGAAAGGCGTTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGTATGATTCAGCTTTAGGTTTGGCAGAATCTGTACAAGAAAGTAGAGATAAAGAAGTTGATGCAAAGATCCCAATCTTGGAACGGGAGTACATGCAAGGTGTATTAATAAGTGAGGTAGTGTTAAATAATATGTTTTCAACAATGTCTAGAAGGGCAAGACGACTTCAGAAAAAGCTTGTAAGGGAGATTAAAAAACCAGGTGAAGCAATCATAAAAGGTCACAGGAGTTATGATTTGATGCTCAATTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATTACGCCTATACAGACGCGAGAAGTTCGAGCATCAGATTTTGGTCCCAAAGCAAGTTTTTGGATGAATTTTCCTAAACAAGGTTCTCAATTAACACCCACTCATGAATCAGAGGATTTTAAATGGAAAGATTATTGCCCCATGGTGTTCAGAAATTTAAGAGAGTTGTTCAAGATTGATGCTGCTGATTACATGATGTCCATTTGTGGAAATGATGCTCTAAGGGAATTATCTTCTCCGGGGAAAAGTGGCAGTGCCTTCTTCCTGTCTCAGGATGATAGTTTCATGATCAAAACGCTGCGAAAATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCGGACTATCATCATCATGTGAAGTCAAATGAAAATACACTCATCACAAAAATTTTTGGCCTGCACAGGATTAAGCCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATCGGAGATTTGATTTAAAAGGTTCATCCCTTGGACGATCATCAGACAAGATAGAAATTGATGAGAATACCACACTCAAAGATTTGGATCTGAACTACAGCTTCTACTTGGAACCGTCTTGGCGGGAGTCTTTATTTAAGCAGATAGAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGTCTTCTTCTAGGTGTTCACTATAGAGCTCCCCAGCGTCTGCGTCCTCTCATATCATACAACCAAAGTAGAAATGTGGATGGATTAGCAATGCTTGCAGAGGAAGACCCTCTGGAGGATGAAGTATCCTATCCACAAGGCCTTGTTCTAGTTCCTCGTGGAGCAGATGATAACAGTGTTGTTGTGGGCTCACACATGAGGGGTAGCCGCCTCCGAGCTTCATCTGCTGGCGATGAGGAAGTGGATCTACTTCTACCCGGTACAGCAAGACTCCAAATCCAGTTGGGTGTGAACATGCCATCAAGGGCAGAACAGATTCCAGGAAAACAAGAAGAAGAAATGTTCCATGAGGTGTACGATGTGGTACTCTACTTGGGTATCATCGACATATTGCAAGACTACAACATGACTAAGAAGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCCGCTGTGGACCCTACGTTCTACTCTCGTCGCTTCCTCCAATTTATTCAGAAAGTGTTTCCACCCAATGCAATCACAGGTTAA 2448 0.4122 MSGPVAIVDHSNGGALSCAERTRSVDAISELDLLANSEIDGFSSVEQLLLSNGESYSGSLYGNVSEGHGKYVWFDGCVYEGEWRRGMRSGHGKLRWPSGAVYEGEFSGGYIHGKGTYKGSDKLKYKGRWRLNVKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYVGNMKGGTMWGKGTLTWINGDSYEGSWLNGMMHGFGVYTWSDGGCYVGTWTFGLKDGKGTFYPKGSRLPSVQEIYLNALRKRGLLPDLRKQNQVRDVKVSENQRSSRVLSSDKLAKGNMLNLEESRGRNVSLERRWSLEVSIEKVIGYDSALGLAESVQESRDKEVDAKIPILEREYMQGVLISEVVLNNMFSTMSRRARRLQKKLVREIKKPGEAIIKGHRSYDLMLNLQLGIRYTVGKITPIQTREVRASDFGPKASFWMNFPKQGSQLTPTHESEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSAFFLSQDDSFMIKTLRKSEVKVLLRMLPDYHHHVKSNENTLITKIFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLFKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQRLRPLISYNQSRNVDGLAMLAEEDPLEDEVSYPQGLVLVPRGADDNSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQIPGKQEEEMFHEVYDVVLYLGIIDILQDYNMTKKIEHAYKSLQFDSLSISAVDPTFYSRRFLQFIQKVFPPNAITG* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0238 815 PIRSF PIP5K_plant 10 812 IPR017163 GO:0005524|GO:0016308
Apr4g0238 815 SUPERFAMILY SAICAR synthase-like 390 808 - -
Apr4g0238 815 Gene3D - 563 808 - -
Apr4g0238 815 SMART morn 192 213 IPR003409 -
Apr4g0238 815 SMART morn 169 190 IPR003409 -
Apr4g0238 815 SMART morn 77 98 IPR003409 -
Apr4g0238 815 SMART morn 215 236 IPR003409 -
Apr4g0238 815 SMART morn 100 121 IPR003409 -
Apr4g0238 815 SMART morn 123 144 IPR003409 -
Apr4g0238 815 SMART morn 146 167 IPR003409 -
Apr4g0238 815 SMART morn 54 75 IPR003409 -
Apr4g0238 815 CDD PIPKc_AtPIP5K_like 394 807 - -
Apr4g0238 815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 480 806 IPR002498 GO:0016307|GO:0046488
Apr4g0238 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 51 173 - -
Apr4g0238 815 Pfam MORN repeat 171 192 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 217 238 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 56 78 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 194 215 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 79 100 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 148 170 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 125 146 IPR003409 -
Apr4g0238 815 Pfam MORN repeat 102 121 IPR003409 -
Apr4g0238 815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 391 808 IPR002498 GO:0016307|GO:0046488
Apr4g0238 815 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 35 813 IPR023610 -
Apr4g0238 815 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 35 813 - -
Apr4g0238 815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 380 562 IPR027484 -
Apr4g0238 815 Gene3D - 201 244 - -
Apr4g0238 815 Gene3D - 154 200 - -
Apr4g0238 815 Gene3D - 109 153 - -
Apr4g0238 815 Gene3D - 58 108 - -
Apr4g0238 815 SMART PIPK_2 421 809 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0238 Apr-Chr4 2009084 2016485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0238 14 811 Acyl Lipid Metabolism Gene Families AT3G09920 73.457 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0238 K00889 - gmx:100800418 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0238 4 2009084 2016485 Apr4g0238 4 2009084 2016485 ECH
Apr4g0238 4 2009084 2016485 Apr8g0544 8 4805521 4815429 PCT