Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0539 ATGAAGCATCAAAGCAAGGTCACACTCTTCCTTCCAAATTTGTTAATACTATTAACCATCCTACTACAATCAACAATATGGATTAGAGCACAGGAAGTTGAGGATGAAAGCGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGCTACATGTAAAAGTGGCACGATGCAATCTCCCATTGATTTGTCAAGCCACAGAGTGAGAGTGGTACGGAAGTTAGGGGAGCTAAAGAAATACTATAAGCCTCAGAATGCCACGGTCAGAAATAGAGGCCATGATATTCAGCTGAAATGGACGGAAGAGGCAGGATCAATAAACATAAACGGCACTGAGTTTTTTCTGCAACAGTGCCACTGGCACTCACCTTCTGAACATACCATCAATGGCAGGAGGTATGACTTGGAGCTCCATATGGTTCATGAAAGCCCAAACACAAACGGGAAAAGCAAGACAGCTGTTGTTGGACTTCTGTATAAGATTGGTCGGTCCGATCCTGTTCTCAACAAGTTGTCAAAATACATAAAAACCATGGTGGATGAAGAAACAGAAAAGAGCATTGGGGTGTTTGATCCCTCAGAAATCAAGTTAGGTGGCAAGAAGTACTTTAGATACATGGGCTCCCTCACTGTCCCTCCTTGCACTGAAGGTGTCATTTGGACTATTAACAAAAAGATAAGAAGTGTGTCAAGGGCCCAAGTCAGGTTACTTAGAGAGGCTGTCCATGATCATGCAGAGAGGAATGCTAGACCAATACAAAGCCTGAATAAACGAGGGATACAACTCTATGCCCCCAAACGCAAGGAATAA 840 0.4357 MKHQSKVTLFLPNLLILLTILLQSTIWIRAQEVEDESEFDYIKGSEKGPSHWGELKKEWATCKSGTMQSPIDLSSHRVRVVRKLGELKKYYKPQNATVRNRGHDIQLKWTEEAGSININGTEFFLQQCHWHSPSEHTINGRRYDLELHMVHESPNTNGKSKTAVVGLLYKIGRSDPVLNKLSKYIKTMVDEETEKSIGVFDPSEIKLGGKKYFRYMGSLTVPPCTEGVIWTINKKIRSVSRAQVRLLREAVHDHAERNARPIQSLNKRGIQLYAPKRKE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0539 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Apr8g0539 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Apr8g0539 279 Gene3D Alpha carbonic anhydrase 35 278 IPR036398 -
Apr8g0539 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Apr8g0539 279 PANTHER ALPHA CARBONIC ANHYDRASE 3 13 277 - -
Apr8g0539 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Apr8g0539 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Apr8g0539 279 PANTHER CARBONIC ANHYDRASE 13 277 IPR023561 GO:0004089|GO:0008270
Apr8g0539 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0539 Apr-Chr8 4768106 4771155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0539 K01674 - gmx:100797935 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0539 8 4768106 4771155 Apr8g0539 8 4768106 4771155 ECH
Apr8g0539 8 4768106 4771155 Apr4g0232 4 1961501 1964404 PCT