Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0232 ATGAAGCGTCAAAGCCATATTTCGACAATTTTGCTAATATCCATCCTATTTTGTTCCACATTAACCAGAGCTCTTGATGAACCTGAATATGGGTACAATGAAAAGAGTAGAGATGGACCCGAACACTGGGGCGATCTCAAAGAAGAATGGGAGGTGTGTAAAAAAGGGGAAATGCAATCTCCAATTGATTTGAGCAATCACAGAGTAAAAGTGATCCCCAAGTTAGGGGAGATAAGGAGGAGCTATAAGCCCCAACATGCTAATGTATTGAATAGGGGTCATGATGTTGCGGTGAACTGGGAAGGGGATGCTGGCTCAATAGACATCAATGGAACACATTTCTTGCTCCAACAATGCCACTGGCACTGGCCTTCCGAACACACCATTAACGGCCGCAGGTATGACTTGGAATTGCATATGGTTCATGTTAGTCCACAGCCTGATGGAACAAACAAGACTGCTGTTGTTGGTCTTCTGTACAAATATGGTTCGCCCGATCCATTTCTCTCTAAGTTGGGAAAATACATAATGGATATTCCTGAAGATGAAGAAGAGAAAAGCATTGGGGTGATTGATCCCAGAGAAATCAAAATGGGCGGCAAGATGTACTACAGGTACATGGGATCGCTCACTGCACCTCCTTGCACCGAAGGCGTTCTTTGGACCATTAACAAAAAGATAAAAACTGTTTCAAGGAGACAAGTAAAGTTACTCAAAGATTCTGTACTTAAATATTATGCAAAAAGGAATGCAAGGCCACTGCAGCCCCTAAATGAGCGTGAGATAGAAGTCTACGACCCCAAGGCAAAGAATAAACCTCATTATTAA 828 0.4263 MKRQSHISTILLISILFCSTLTRALDEPEYGYNEKSRDGPEHWGDLKEEWEVCKKGEMQSPIDLSNHRVKVIPKLGEIRRSYKPQHANVLNRGHDVAVNWEGDAGSIDINGTHFLLQQCHWHWPSEHTINGRRYDLELHMVHVSPQPDGTNKTAVVGLLYKYGSPDPFLSKLGKYIMDIPEDEEEKSIGVIDPREIKMGGKMYYRYMGSLTAPPCTEGVLWTINKKIKTVSRRQVKLLKDSVLKYYAKRNARPLQPLNEREIEVYDPKAKNKPHY* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0232 275 CDD alpha_CA_prokaryotic_like 39 263 IPR041891 -
Apr4g0232 275 SUPERFAMILY Carbonic anhydrase 29 262 IPR036398 -
Apr4g0232 275 Pfam Eukaryotic-type carbonic anhydrase 39 263 IPR001148 -
Apr4g0232 275 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 274 - -
Apr4g0232 275 PANTHER CARBONIC ANHYDRASE 1 274 IPR023561 GO:0004089|GO:0008270
Apr4g0232 275 ProSitePatterns Alpha-carbonic anhydrases signature. 125 141 IPR018338 GO:0004089|GO:0008270
Apr4g0232 275 SMART Carb_anhydrase_2a 32 266 IPR001148 -
Apr4g0232 275 Gene3D Alpha carbonic anhydrase 27 273 IPR036398 -
Apr4g0232 275 ProSiteProfiles Alpha-carbonic anhydrases profile. 28 266 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0232 Apr-Chr4 1961501 1964404 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0232 K01674 - gmx:100799362 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0232 4 1961501 1964404 Apr4g0232 4 1961501 1964404 ECH
Apr8g0539 8 4768106 4771155 Apr4g0232 4 1961501 1964404 PCT