Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0536 ATGTTCAAGAAAATCATGAAGGGCGGAAAGAAGCCCTCCAAGTCTGACTCTGCCGACCCTCCGCCGGCGGCGTACGCCGGAAACAACCGCAATTCGTCGGCGGCAGGTTCTGCCAATGTCGTCGTTAACCACGCCTCACGCGGTGGAGCCGGGGCCTCGGTGGCGAATTCCGCTGCCGCGATGCCCCCGCCGGTCGGCGCCATGGAACCGTTGCCGCTGTTCCGCGACGTGCCGGTTTCCGAGCGGCAGAACATGTTTCTCCGGAAGTTCCAAATGTGCTGCTACGCTCTGGATTTCTCCGACACGCTGAAGAACGTTAGGGAGAAAGAGATCAAGCGGCAAGCGCTGATGGACCTCGTGGACTTCATCCAATCTGGTTCCGGCAAGATATCGGAGAATTGTCAGGAAGAGATGATTCGAATGATATCCGTCAACATTTTCCGGTGCTTGCCGCCTGCGTCGCACGAGAACACAGGGCAAGAGCCCGCAGATCCTGAAGAAGAGGAGCCGTGCTTGGATCCCGCATGGCCTCATTTGCAGCTGGTATATGAGCTTCTCCTCAGATACGTTGTGTCGTCTGATACTGATACCAAGGTTGCAAAACGGTATATTGATCACTCCTTTGTGCTCAAGTTGCTTGATTTGTTTGACACTGAGGACCCTCGAGAGCGTGAGTATTTGAAAACCATACTGCATCGTATATATGGCAAGTTCATGGTTCATAGGCCCTTCATTAGAAAGGCTATTAACAACATTTTTTACCGGTTTATATACGAGACTGAGAGGCACAGTGGTATTGGGGAGCTTCTAGAGATTCTTGGGAGTATCATTAATGGGTTTGCTCTACCCATGAAAGAGGAGCATAAGTTGTTTCTTGTAAGGGCGTTGCTACCACTGCATAAACCTAAGTCTGTTGCTGTGTACCACCAGCAATTGTCTTACTGCATCACTCAGTTCGTGGAGAAGGATTTCAAGCTAGCGGATACGGTTATCAGGGGGTTGTTGAAGTATTGGCCTCTCACCAATTGCCAGAAGGAAGTTCTCTTCCTTGGAGAACTGGAGGAAGTGCTGGAGGCCACGCAGGCTGCGGAATTTCAACGCTGCATGGTTCCCCTTTTCCGACAGATTTCCCGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAGCGAGCCCTCTTTTTGTGGAATAATGAGCATATTGTGAGTTTAATTGCCCAAAACAGGACTGTGATATTGCCGATAATATTTGAAGCGTTTGAGAAAAATATCTCTAGTCATTGGAACCAGGCAGTTCACGGACTGACTGTGAATGTTCGCAAAATGTTCGTGGAAATGGATGCAGAATTGTTTGAAGAGTGTCAGAGGCAGCATGCTGAGAAATTGGCTAAAGCCAAAGAAGAGGCAGAGCAGCGAGAACTTAAATGGAAGAGATTGGCGGATGCCGCAGCACAGAATGGGGTGGAGGATATGGTCACAACTTAG 1482 0.4993 MFKKIMKGGKKPSKSDSADPPPAAYAGNNRNSSAAGSANVVVNHASRGGAGASVANSAAAMPPPVGAMEPLPLFRDVPVSERQNMFLRKFQMCCYALDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKISENCQEEMIRMISVNIFRCLPPASHENTGQEPADPEEEEPCLDPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDTEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAVYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNISSHWNQAVHGLTVNVRKMFVEMDAELFEECQRQHAEKLAKAKEEAEQRELKWKRLADAAAQNGVEDMVTT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0536 493 PIRSF PP2A_B56 6 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr8g0536 493 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 487 - -
Apr8g0536 493 SUPERFAMILY ARM repeat 83 459 IPR016024 -
Apr8g0536 493 Gene3D - 78 481 IPR011989 -
Apr8g0536 493 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 487 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr8g0536 493 Coils Coil 451 478 - -
Apr8g0536 493 MobiDBLite consensus disorder prediction 1 34 - -
Apr8g0536 493 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 71 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0536 Apr-Chr8 4739361 4746859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0536 K11584 - gmx:100795277 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0536 8 4739361 4746859 Apr8g0536 8 4739361 4746859 ECH
Apr4g0228 4 1936282 1942272 Apr8g0536 8 4739361 4746859 PCT