Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0228 ATGTTTAAGAGAATCATGAAGGGAGGGCAAAAGAAGCCCTCCAAGTCCGAAACAGATGCCTCCGCCTTCGGCTACGGTCCACCGGCCAACAACGCCCCCGTCACTACGGCGGTGACTGTGCCTCCGCCTTCGGGGACCATAGAACTGCTCCCTCTCTTCCGCGACGTGGCCGTTTCCGAGCGCCAGAACCTCTTCCTCCGGAAGCTTCAGGTATGCTGCCACGTGTTGGATTTCTCCGACACGCTGAAATCGGTTCGGGAGAAGGAAATCAAGAGGCAAACGCTGATGGAGTTGGTGGATTTCATTCAATCGGGTTCGGGGAAGATAACGGAGACTTGCCAGGAAGAGATGATCAAAATGGTGTCGGTGAACATTTTCCGGTGCTTGCCGCCGGCGTCGCACGAGAACACCGGCCAAGAACCCACCGATCCGGAGGAGGAAGAAACATGCTTGGACCCCTCGTGGCCACACTTGCAGCTCGTGTATGAGCTTCTTCTCAGATACGTGGTTTCTTCAGATACTGATACCAAGGTTGCTAAACGGTATATCGATCACTCTTTTGTGCTGAAATTGCTTGATTTGTTTGATTCTGAGGACCCCCGAGAGCGTGAGTATTTGAAAACCATATTGCATCGTGTGTATGGAAAATTCATGGTTCATCGCCCGTTTATTAGGAAAGCCATTAACAATATCTTTTATCGGTTTATATATGAGACGGAGAGGCATAGTGGTATTGGGGAGCTTCTGGAGATTCTTGGCAGCATTATTAATGGGTTTGCATTGCCAATGAAGGAGGAGCATAAGTTGTTTCTTGTGAGGGCGCTTTTGCCTCTGCATAAACCGAAGTCCATTGCTGTCTACCATCAGCAGTTATCATATTGTATTGCTCAGTTTGTTGAGAAGGATTACAAGCTTGCGGATACTGTTATTAGGGGTTTGTTGAAGTATTGGCCTGTCACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAATTGGAGGAGGTGCTCGAGGCCACGCAAGCTGCAGAATTCCAACGCTGTATGGTCCCTCTTTTTAGACAGGTTGCCCGCTGCCTCAATAGTTCTCACTTCCAGGTTGCAGAACGAGCACTCTTTTTATGGAATAATGAGCACATTGTCAGCTTAATCGCCCAAAACAGGACTGTAGTATTGCCGATAATATTTGAAGCAATGGAGAAGAATATCCAGAGTCATTGGAACCAGGCTGTTCATGGGCTAACTGTGAACGTTCGGAAAATGTTTATAGAAATGGACGCTGAATTGTTTGAAGAGTGCCAGAGGCAGTATGCAGAAAGAGAGGCTAAAGCAAAAGAAATAGAAGAGCAGCGGGAATTGAATTGGAAGAGACTGGCAGATGCGGCTGCACAGAATGGGGCAGATATGGTGACGGCTTAG 1416 0.4823 MFKRIMKGGQKKPSKSETDASAFGYGPPANNAPVTTAVTVPPPSGTIELLPLFRDVAVSERQNLFLRKLQVCCHVLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMVSVNIFRCLPPASHENTGQEPTDPEEEETCLDPSWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSIAVYHQQLSYCIAQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQVARCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEAMEKNIQSHWNQAVHGLTVNVRKMFIEMDAELFEECQRQYAEREAKAKEIEEQRELNWKRLADAAAQNGADMVTA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0228 471 Coils Coil 429 449 - -
Apr4g0228 471 PIRSF PP2A_B56 11 470 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr4g0228 471 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 468 - -
Apr4g0228 471 MobiDBLite consensus disorder prediction 1 26 - -
Apr4g0228 471 SUPERFAMILY ARM repeat 62 443 IPR016024 -
Apr4g0228 471 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 50 461 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr4g0228 471 Gene3D - 58 460 IPR011989 -
Apr4g0228 471 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 468 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0228 Apr-Chr4 1936282 1942272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0228 K11584 - gmx:100798308 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0228 4 1936282 1942272 Apr4g0228 4 1936282 1942272 ECH
Apr4g0228 4 1936282 1942272 Apr8g0536 8 4739361 4746859 PCT