Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0464 ATGGGATCACTAGAAAGGTCAAAAAAGAAAGTTATGCTATGGAAGAAAGCCATGGCGCATTTTTCTCTTTGTTTTGTGATGGGGTTCTTTACAGGCTTTGCTCCAACAGGTAAATCTTTATTTCCCAGCCATGTTGCAGCCTCAAATAGATCAGAATTTGCACCACAACCTATTGAAGTGTCACATATGACAACAAATGTCAATAGAAGTTGGATAGCTCCAACGCCAGAGACAATGCCAACAAGGTCTATAGTCAACAAGCAAACAACAAAATTTCATGCAAAACAAGGACCCCAGTTGAAGCCTCGGAGGCTTCTAATCATTGTAACTCCAACAAGCACAAGACTTCCCCTCCAAGCAGTGGTTTTGACAAGGTTGGCAAATACTATGAAGTTGGTTCCTCAACCATTGCTTTGGATTGTTGTGGAAGGGCAAACAGATTCTACAGATGTTTCAAAGACACTTAGGAAGACTGGCATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCACGGATGTGGAAACTGAGTTGAATCACCAGAGAAATCTTGCTCTCAAGCACATTGTGCATCATAGGCTAAGTGGGATCGTACACTTCGCTGAGCTTTCCAATGTTTATGATCTTGAATTCTTCCAACAATTAAGACATATTGAGGTGTTTGGAACATGGCCAACAGCAATGTTAGCAGCTAACAGGAAGAAAGTGACAATCGAAGGACCTGTATGTGATTCTTCACAAGTCATGGGGTGGCATTTAAAGAATATGAAGAACGAAACTGAAACAATTACCCCTCCCATTCATATTTCAAGTTTTGCATTCAATAGCTCCATCCTCTGGGACCCTGAGAGATGGGGTCGCACTTCTTCTGTTCAAGACACATCTCAGAATTCAATCAAATTCGTGAAGCAAGTAGTTCTAGAGGATGAAGCAAAGTTGAAGGGAATTCCCCCAGAGGACTGCTCCAGAATATTACTTTGGCGTTTCAATTTTCATGGCCGCACCATTTCAAATCATAAATCTCTAACTACTACATCAGAAGGCATCACAAGATAA 1056 0.411 MGSLERSKKKVMLWKKAMAHFSLCFVMGFFTGFAPTGKSLFPSHVAASNRSEFAPQPIEVSHMTTNVNRSWIAPTPETMPTRSIVNKQTTKFHAKQGPQLKPRRLLIIVTPTSTRLPLQAVVLTRLANTMKLVPQPLLWIVVEGQTDSTDVSKTLRKTGIMYRHLVSKENFTDVETELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRHIEVFGTWPTAMLAANRKKVTIEGPVCDSSQVMGWHLKNMKNETETITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSRILLWRFNFHGRTISNHKSLTTTSEGITR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0464 351 CDD GlcAT-I 104 331 IPR005027 GO:0015018|GO:0016020
Apr8g0464 351 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 349 IPR029044 -
Apr8g0464 351 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 337 - -
Apr8g0464 351 Pfam Glycosyltransferase family 43 126 330 IPR005027 GO:0015018|GO:0016020
Apr8g0464 351 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 337 IPR005027 GO:0015018|GO:0016020
Apr8g0464 351 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 344 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0464 Apr-Chr8 3959786 3962367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0464 1 335 Glycosyltransferase AT2G37090 58.908 6.42e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0464 K20869 - gmx:100803434 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0464 8 3959786 3962367 Apr8g0464 8 3959786 3962367 ECH
Apr4g0172 4 1426498 1428744 Apr8g0464 8 3959786 3962367 PCT