Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0415 ATGGATTCCACCAATGGATTGAAACATTCGGTACCGGGGAAGGAGGCGCCACTTGTCACTGACACGCTCACTCTTAGGATGTTTGTGGGGACTTGGAATGTCGGAGGAAAGTCTCCGAACGAGGGATTGAACTTGAGGGATTGGTTGCTGTTGCCTTCTCCAGCTGAAATCTATGTCATTGGGTTCCAGGAGATCATACCCCTAAACGCAGGGAACGTGCTTGGGCCAGAAGACAGTGGGCCAGCAGGGAAGTGGCTGACCCTAATTCGTGAAGCCTTGAACTCTAACACAAGCTCCAATGGAGAAAGCACTACGACATTGCCTTGTGAGAGTAGGATCCAACGCGACCCAAGTGAACAACAACACTATTATTGTCTTGCAGCCAGCAAGCAAATGGTGGGTATCTTCTTGTGCGTGTGGGTCCGAGCGGATCTTTACAAGCATGTTTGCAATCTAAAGGTGTCATGTGTTGGTAGAGGCATCATGGGCTATCTAGGAAATAAGGGTTCAATATCAATCAGCATGACATTTTACCACACTACGTTCTGTTTCGTGTGTACCCATTTGGCCTCCGGAGAGAAAGATGGTGACGAGATGCGAAGAAATTTGGATGTCTCGGAAATCTTAAAGAAAACTAAATTTTCTCATTCATTCAAAGCTCTTGGTCATCCACTTCCTCCAGAAAGCATACTAGAGCATGAGAAGATTATTTGGCTTGGGGATTTGAATTATCGGCTTGCTGCTGGTTATAATGACACACATGAGCTATTAAAGAAGAATGATTGGCAGGCACTATTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTTAAAGAGTGGAAGGAAGGGAAAATACTTTTTGCTCCTACTTACAAATATTTATTCGATTCTGACCAATATGTTGCCCAAACCAACAAGTCTAAGGAAAAACGACGGACCCCGGCTTGGTGTGATCGAATTCTGTGGAAAGGTGAAGGGCTTGAGCAACTATGGTACGTGCGAGGAGAGTCCAAATTCTCGGACCACAGGCCCGTGTATTCACTATTCTCTGTCCACGTGGACTTGACACGTAAGAAGCTAACTCCCTCGATTGCGGCCCCAGATTTGTCAATCACAAGGTCGTGTCCCTCTCGACCCTTGACAAACACTGCCATGTCATCATCGTGCTTCGCTAAAGTTCAGGCAGAGGAGCAGCTATTGTTACTAACGGGGGCACAAAGATGCATAGACCCCGCACCTGCAGGGATCTGA 1263 0.4679 MDSTNGLKHSVPGKEAPLVTDTLTLRMFVGTWNVGGKSPNEGLNLRDWLLLPSPAEIYVIGFQEIIPLNAGNVLGPEDSGPAGKWLTLIREALNSNTSSNGESTTTLPCESRIQRDPSEQQHYYCLAASKQMVGIFLCVWVRADLYKHVCNLKVSCVGRGIMGYLGNKGSISISMTFYHTTFCFVCTHLASGEKDGDEMRRNLDVSEILKKTKFSHSFKALGHPLPPESILEHEKIIWLGDLNYRLAAGYNDTHELLKKNDWQALLEKDQLRIEQRAGRVFKEWKEGKILFAPTYKYLFDSDQYVAQTNKSKEKRRTPAWCDRILWKGEGLEQLWYVRGESKFSDHRPVYSLFSVHVDLTRKKLTPSIAAPDLSITRSCPSRPLTNTAMSSSCFAKVQAEEQLLLLTGAQRCIDPAPAGI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0415 420 Pfam Endonuclease/Exonuclease/phosphatase family 30 346 IPR005135 GO:0003824
Apr8g0415 420 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 8 403 - -
Apr8g0415 420 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 403 IPR045849 GO:0004445|GO:0046855
Apr8g0415 420 SMART i5p_5 23 361 IPR000300 GO:0016791|GO:0046856
Apr8g0415 420 Gene3D Endonuclease/exonuclease/phosphatase 8 373 IPR036691 -
Apr8g0415 420 SUPERFAMILY DNase I-like 16 359 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0415 Apr-Chr8 3527828 3531936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0415 5 357 Acyl Lipid Metabolism Gene Families AT1G65580 31.017 5.30e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0415 - - aprc:113870745 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0125 4 1083024 1086568 Apr8g0415 8 3527828 3531936 PCT