Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0125 ATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCGAACCAAAGGCTGAACTTGAGGAATTGGCTGACGTCTCCTTCACCAGCTGACATCTATGTTATTGGGTATGCTTTTGGTCACTGGAACAAGTATAAATGGTTTCACTCTAATTTTTCACGCATGATTATTGATAGGTTCCAAGAAATTGTACCGCTAAATGCAGGGAACGTGCTTGGGCCGGAGGACAGTGGTCCAGCAGCGAAATGGTTGACCCTTATTGGTCAAGCCTTGAACAGCAACAATTTCTCGGAGTTCCTCTCTTTAGAGGACGATTTGGATAATGGAGAAAGGTCTCCTACGAGTCCGCGACGCTATTGCTTAGCTGCAAGCAAGCAAATGGTAGGTATCTTCTTGTCCGTGTGGGTACGAACTGATCTTTGCGACCATATTAGCAATGTGAAAGTGTCATGCGTTGGCAGAGGCATCATGGGCTATCTTGGAAATAAGGGTTCAGCATCAATTAGCATGACATTGCACCACACCACGTTCTGCTTTGTTTGCACCCACTTGGCCTCTGGGGAGAAATTTGGTGACGAGTTGCGAAGAAACATGGACGTCTCGGAAATCTTGAAGAAAACTAAATTTTCTCACTCGTTTAAATCCCTTGGTCAACCACTCCGTCCTGAAAGCATACTGGAACACGATAATGTCATTTGGCTTGGGGATTTAAATTATCGGCTTGCTGCTGGCTACGATGATACACATGAACTATTAAAGAAGAATAATTGGCAGGCATTACTAGAGAAGGATCAGCTAAGGATAGAGCAGAAAGCTGGACGAGTATTTGAAGGTTGGAATGAAGGGAACATATATTTTGCTCCCACATACAAATACTTGACCAATTCTGACCACTATGTTGCCCAAACCTTCAAATCTAAGGAAAAACGACGGACCCCTGCTTGGTGCGATCGAATTCTGTGGAAAGGGGAAGGGATCAATCAAATGTGGTATGTTCGAGGTGAATCAAAATTCTCGGATCACAGGCCCGTGTATTCACTATTCTCTGTTCAAGTGGACATGACAAGCAAGAATCTCGCTCCTTCGGCAGCCACTATGCCCAGGTCCTGCCCCTTAAAACCGTTGACTAATGCTGCGTTGTCATCGACTTGTTGCGCTGCTAAAGTGCAGGTTGAAGAGCAGCTCTTACTGCTAACGAGGACACAAAGTTGCATTGACTCCGTACCCAGATAG 1230 0.4561 MFVGTWNVGGKSPNQRLNLRNWLTSPSPADIYVIGYAFGHWNKYKWFHSNFSRMIIDRFQEIVPLNAGNVLGPEDSGPAAKWLTLIGQALNSNNFSEFLSLEDDLDNGERSPTSPRRYCLAASKQMVGIFLSVWVRTDLCDHISNVKVSCVGRGIMGYLGNKGSASISMTLHHTTFCFVCTHLASGEKFGDELRRNMDVSEILKKTKFSHSFKSLGQPLRPESILEHDNVIWLGDLNYRLAAGYDDTHELLKKNNWQALLEKDQLRIEQKAGRVFEGWNEGNIYFAPTYKYLTNSDHYVAQTFKSKEKRRTPAWCDRILWKGEGINQMWYVRGESKFSDHRPVYSLFSVQVDMTSKNLAPSAATMPRSCPLKPLTNAALSSTCCAAKVQVEEQLLLLTRTQSCIDSVPR* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0125 409 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 1 399 - -
Apr4g0125 409 SUPERFAMILY DNase I-like 1 353 IPR036691 -
Apr4g0125 409 Gene3D Endonuclease/exonuclease/phosphatase 1 365 IPR036691 -
Apr4g0125 409 Pfam Endonuclease/Exonuclease/phosphatase family 4 340 IPR005135 GO:0003824
Apr4g0125 409 SMART i5p_5 1 355 IPR000300 GO:0016791|GO:0046856
Apr4g0125 409 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 1 399 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0125 Apr-Chr4 1083024 1086568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0125 1 351 Acyl Lipid Metabolism Gene Families AT1G65580 29.188 5.08e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0125 - - gmx:100800223 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0125 4 1083024 1086568 Apr8g0415 8 3527828 3531936 PCT