Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0411 ATGGCTCCCCCTATTGAGACCCCAAACAAGGTTACCATCTCTCATCATTCACGACACCCTCCTCTTAATGAGAGGATTCTTTCATCCTTGACCAGAAGATCTGTTGCTGCACACCCGTGGCATGATCTTGAGATTGGACCTGAAGCTCCAATTATCTTCAACTGTGTGGTTGAAATTGGGAAAGGAAGCAAGGTGAAGTATGAACTGGACAAAAAAACTGGACTTATTAAGGTTGATCGGATACTTTACTCGTCAGTTGTGTATCCTCACAACTATGGGTTTATCCCACGCACTATTTGTGAAGACAGTGACCCCATGGATGTCTTGGTTATCATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTACGGGCCAAAGCTATTGGACTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAATTGCTGTGTGTGCTGATGATCCCGAGTATCGGCATTACAATGATATCAAGGAGCTTCCTCCACACCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGATTACAAGAAGAATGAGAACAAAGAAGTTGCAGTGAACGATTTTCTTCCTGCCTCAACTGCCTATGAAGCGATCAAGCATTCCATGAGCTTGTATGCGGACTACATTGTAGAGAGCTTGAGGCGGTAG 651 0.4424 MAPPIETPNKVTISHHSRHPPLNERILSSLTRRSVAAHPWHDLEIGPEAPIIFNCVVEIGKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTICEDSDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAYEAIKHSMSLYADYIVESLRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0411 216 CDD pyrophosphatase 52 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr8g0411 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr8g0411 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr8g0411 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr8g0411 216 SUPERFAMILY Inorganic pyrophosphatase 30 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr8g0411 216 PANTHER BNAC07G03580D PROTEIN 22 215 - -
Apr8g0411 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Apr8g0411 216 PANTHER INORGANIC PYROPHOSPHATASE 22 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0411 Apr-Chr8 3486145 3490332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0411 K01507 - gmx:100784203 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0123 4 1060349 1064021 Apr8g0411 8 3486145 3490332 PCT