Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0123 ATGGTTGAAATCGTGACGGATACCGAAACTGCTGCAGATGTGGTTCCACACAATGAGACTCCGAACAATGTTCCTGTCTCTCATTATTCCTCACATCCCCCTCTTAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACACCCGTGGCATGACCTTGAGATAGGGCCTGGTGCTCCAATGATCTTTAATTGTGTGGTAGAGATTGGGAAAGGGAGCAAAGTGAAATATGAACTGGACAAAAAATCGGGGCTTATTAAGATTGATCGAGTGCTTTATTCATCAGTTGTGTATCCCCACAATTATGGATTTATCCCACGTACTATTTGTGAAGACAGTGATCCCATGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAAATAATCGCTGTCTGCGCTGATGATCCTGAGTATCGACATTACACTGATATCAAGGAGCTTCCTCCACATCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAGGTTGCAGTAAATGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCGATTAAGAGATCCATGAGCTTGTATGCGGACTACATAGTGGAAAGCCTGAGGCGTTAG 690 0.4348 MVEIVTDTETAADVVPHNETPNNVPVSHYSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPMIFNCVVEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAIKRSMSLYADYIVESLRR* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0123 229 Hamap Inorganic pyrophosphatase [ppa]. 64 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr4g0123 229 Gene3D Inorganic pyrophosphatase 47 225 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr4g0123 229 CDD pyrophosphatase 64 217 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr4g0123 229 ProSitePatterns Inorganic pyrophosphatase signature. 115 121 - -
Apr4g0123 229 PANTHER BNAC07G03580D PROTEIN 35 228 - -
Apr4g0123 229 SUPERFAMILY Inorganic pyrophosphatase 44 224 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr4g0123 229 PANTHER INORGANIC PYROPHOSPHATASE 35 228 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Apr4g0123 229 MobiDBLite consensus disorder prediction 13 28 - -
Apr4g0123 229 MobiDBLite consensus disorder prediction 1 28 - -
Apr4g0123 229 Pfam Inorganic pyrophosphatase 68 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0123 Apr-Chr4 1060349 1064021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0123 K01507 - gmx:100784203 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0123 4 1060349 1064021 Apr8g0411 8 3486145 3490332 PCT