Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0392 ATGGAGGAAGCGCTTGAGCTCGCACGCGCCAAGGATGCGAAGGAGAGGATGGCGGGCGTCGAACGCCTCCACCAACTTCTGGAAGCTTCTAGAAGGAGTCTCAGTTCCGGTGAAGTCACTTCCCTCGTCGATTGTTGCTTGGATCTCTTGAAGGACAGTAGCTTCAGAGTCTCTCAGGGCGCGCTTCAGGCCTTGGCATCAGCCGCCGTTCTCGCCGGCGACCACTTTAAGCTTCACTTCAATGCTCTTGTTCCCGCCGTCGTCGACCGCTTGGGAGACGCCAAACAGCCCGTACGCGACGCCGCGAGACGCCTCCTGCTCACTCTCATGGAGGTTTCATCTCCAACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACATGCAAAAGCTGGAGAGTCAGAGAAGAATTTGCGCGAACTGTCACATCTGCTATTGGTCTATTTTCATCTACTGAACTTCCCCTTCAACGAGCTATTCTTCCTCCTATTTTACAGTTGCTGAATGATCCGAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGCCACAATCTTCCTTCATCTTTGGTGAAAGCTATAAATGCCAGGTTGGAGGGAATTCAACCAAAAGTTCACTCTTCAGATGGTATTTCTAGTGGTTATATGGCTGGGGAAATTAAGCCTGTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAAGCTAAAAGTTCATCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGATGTCACGGAGAAAGCTATAGAACCTATCAAGGTCTATTCAGAGAAGGAGTTAATGAGGGAAATAGAGAAGATTGCATCTACACTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGGCTTGTTTTGGGAGGTGCTGCTGATTATCCGTCTTTCAATGGACTCTTGAAGCAGCTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGGGTTGCCATCTATTATGCTTTTTGTCAAAGGATCTCCTGGGTGATTTTGAAGCTTGTGCTGAAATGTTCATACCAGTCCTTTTGAAGCTGGTGGTAATTACAGTGCTTGTAATTGCGGAATCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGCTGATTGTGCCAAAAATGATCGTAGTGCAATACTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAACGATCAGCTGATTTATATGAGGATATGATTAGATGTTGTGTCTCAGACGCAATGAGTGAGGTGCGGTCGACTGCAAGGATGTGTTACAGAATGTTTGCGAAAACTTGGCCAGAACGTTCCCGACACCTGTTTTCTTCCTTTGACTCTGCTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATGCATAGGCGACATGCATCACCTTCCATTCGTGATAGAGGTTCATTGATGTCATTAACTAGTCAAGCTTCAGCTCCCTCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACCGAAGTTCAAGTTTATCATCAGGGACTTCTATATCCTCTGGTGTTCTTCTTTCACAGGCCAAATCACTTGGTAAAGGTACAGAACGAAGTTTGGAAAGCGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTCTGATAAGCATGGTTCATCTGCTCTCCGGTCATCGAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCGCCATTCCCAGCTGCTGTCCCAGCATCTAATCATCTGTCTAGCTTAATGACTGAATCAACTGCTTCTGGTGCAAATAAAGGTAGTAACCGAAATGGTGGTTTGGGTTTGTCCGACATAATCACGCAAATTCAAGCTTCCAAAGATTCTGGTCGGTTATCATATAATAGTAATGTTGGTATTGAGCCCTTATCAGCATTTTCATCGTACTCAAGTAGAAGGGCTACTGAAAAATGTCAAGAAAAAAGTTCTGTTGATGAAAACAGTGACATGAGGGAGACTAGGCGATATGTAAACCCCAACATAGAAAGGCAGTATGTGGATACCCATTATAGGGAAGGCAACTTTAGGGATTCACAGAATAGTTATGTACCCAATTTCCAAAGGCCACTTTTGAGAAAGCATGTAGGTGGACGTGTGTCTGCTGGCAGGAGGAGAAGTTTTGATGATAGCCAATTATCTCTTGGGGAGATGTCAAATTATGTAGATGGACCAGCATCTCTTCTTGAAGCACTGAGTGAAGGACTTAGCTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCGTTGTTGCAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCATTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGCAGATATTATTTTGGCATGTCGAAAGCCCTTTGAGGGTTACATGGAGCGAATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGATACTCTCTTACCTGCATTGTTACGCTCACTTGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAATAAGTTCCTTTAACAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATCGGAATCCTAAAATTATGGCTTGCCAAGTTGGCCCCATTGGTTCATGATAAAAATACAAAGCTTAAAGAAGCAGCTATAACATGCATTATATCGGTGTATTCTCACTTTGATTCATCTGCTGTTTTGAATTTTATCCTTAGTTTGTCTGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTGGTGAATTATCTGCAGAACAAGAAGGAGCGACGTTCTAAGTCTTCCTATGACCCATCTGATGTTGTGGGAGCATCCTCTGAAGAGGGATATGCTGGTTTATCTAGGAAAGCTCATTATATTGGAAGGTATTCTACTGGTTCTCTGGATAGTGATGGTGGCAGGAAGTGGAGTTCCCAAGATTCAACCCTGATTAAAGCCAGCCTTGGCCAAGCAGCTTCTGATGAAACTGAGGAACAAACTGATTTTAATAATGATATTTTTGGTTCAAAAACTAAAGATCTTGCTTACACAGTCAATTCAATGGGTCAAAACTTTGGCTTTCAAACTAGCCAACTAGGACATGTGGACAGTAGCATGAATTTTGAGGGTCTGTCATCCGATCTGGATGTTAATGGTCTGACATCATTAGAACATCTAAATATATCTGAAGACTTTGGACATGTCAAAGAACATCCTTCTGAATTGAACCATAATCGTCAATCAGCTGAAGATGTGAAGATTAACTCTATAACTGACACAGGACCCAGCATTCCTCAGATTCTTCATTTGATATGCAGTGGGGTTGATGGAAGCCCTATTTCAAAAAAGCGTACTGCACTTCAACAGCTAGTTGAAGCTTCTATAGCAAATGATCATTCTGTTTGGACTCAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGGGCTTTCGCTGATAGCTGAAATGCTTCAAAACCAGAAAGATGCCATGGAGAATTCAGTTGAGATTGTAATTGAAAAGATGCTTAATGTTACGAAGGATATTGTTCCCAAGGTCTCAAATGAAGCAGAGCACTGCTTGACCATTGTTTTATCTCAGCATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACTCTTGTCACTTGCATAAATTGCTTGACAAAGCTTGTGGGGCGGCTCTCTGAAGAGGAACTGATGGCCCAGTTACCCTCATTTCTGCCTGCCTTGTTTGAAGCTTTTGGAAACCAGAGTGCCGATGTTCGTAAGACCGTTGTTTTCTGTCTTGTGGATATTTATATCATGCTAGGGAAAGCTTTTTTGCCGTATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTTACCATTTATGCAAATCGGATCTCACAGGCAAGGACAGGAAAGTCAATTGAGGTCACTCACGATTAG 4314 0.4312 MEEALELARAKDAKERMAGVERLHQLLEASRRSLSSGEVTSLVDCCLDLLKDSSFRVSQGALQALASAAVLAGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKSWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQLLNDPNPAVREAAILCIEEMYAQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVHSSDGISSGYMAGEIKPVGVNPKKSSPKAKSSSRENSLFGGEGDVTEKAIEPIKVYSEKELMREIEKIASTLVPEKDWSIRIAAMQRIEGLVLGGAADYPSFNGLLKQLVGPLSTQLSDRRSSIVKQGCHLLCFLSKDLLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRHLFSSFDSAIQRLINEEDGGMHRRHASPSIRDRGSLMSLTSQASAPSNLTGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHGSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLSSLMTESTASGANKGSNRNGGLGLSDIITQIQASKDSGRLSYNSNVGIEPLSAFSSYSSRRATEKCQEKSSVDENSDMRETRRYVNPNIERQYVDTHYREGNFRDSQNSYVPNFQRPLLRKHVGGRVSAGRRRSFDDSQLSLGEMSNYVDGPASLLEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDTLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLVNYLQNKKERRSKSSYDPSDVVGASSEEGYAGLSRKAHYIGRYSTGSLDSDGGRKWSSQDSTLIKASLGQAASDETEEQTDFNNDIFGSKTKDLAYTVNSMGQNFGFQTSQLGHVDSSMNFEGLSSDLDVNGLTSLEHLNISEDFGHVKEHPSELNHNRQSAEDVKINSITDTGPSIPQILHLICSGVDGSPISKKRTALQQLVEASIANDHSVWTQYFNQILTVVLEVLDDSDSSIRELGLSLIAEMLQNQKDAMENSVEIVIEKMLNVTKDIVPKVSNEAEHCLTIVLSQHDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSEEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKSIEVTHD* 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0392 1437 Gene3D - 795 1020 IPR011989 -
Apr8g0392 1437 Gene3D - 1214 1429 IPR011989 -
Apr8g0392 1437 Gene3D - 1 223 IPR011989 -
Apr8g0392 1437 MobiDBLite consensus disorder prediction 610 635 - -
Apr8g0392 1437 MobiDBLite consensus disorder prediction 239 263 - -
Apr8g0392 1437 MobiDBLite consensus disorder prediction 696 717 - -
Apr8g0392 1437 Coils Coil 1273 1293 - -
Apr8g0392 1437 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Apr8g0392 1437 MobiDBLite consensus disorder prediction 247 261 - -
Apr8g0392 1437 Pfam CLASP N terminal 285 500 IPR024395 -
Apr8g0392 1437 Pfam CLASP N terminal 801 996 IPR024395 -
Apr8g0392 1437 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Apr8g0392 1437 SUPERFAMILY ARM repeat 290 1427 IPR016024 -
Apr8g0392 1437 Gene3D - 267 507 IPR011989 -
Apr8g0392 1437 SMART TOG_3 3 224 IPR034085 -
Apr8g0392 1437 SMART TOG_3 270 514 IPR034085 -
Apr8g0392 1437 SMART TOG_3 783 1029 IPR034085 -
Apr8g0392 1437 SMART TOG_3 1193 1429 IPR034085 -
Apr8g0392 1437 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Apr8g0392 1437 PANTHER PROTEIN, PUTATIVE-RELATED 28 1429 - -
Apr8g0392 1437 MobiDBLite consensus disorder prediction 701 717 - -
Apr8g0392 1437 Coils Coil 10 30 - -
Apr8g0392 1437 SUPERFAMILY ARM repeat 2 402 IPR016024 -
Apr8g0392 1437 PANTHER CLASP 28 1429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0392 Apr-Chr8 3326095 3341094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0392 K16578 - gmx:100801377 2514.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0392 8 3326095 3341094 Apr8g0392 8 3326095 3341094 ECH
Apr4g0098 4 881701 897187 Apr8g0392 8 3326095 3341094 PCT