Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0098 ATGGAGGAAGCGCTGGAACTCTCACGTGCCAAGGACACGAAGGAGAGGATGGCTGGCGTAGAGCGTCTCCACCAACTCCTGGAAGCTTCTAGAAAGAGCCTCTCCTCTTCCGAGGTCACTTCTCTCGTTGACACTTGTTTGGATCTCTTGAAGGACAACAACTTCCGCGTCTCTCAGGGCGCTCTTCAGGCACTCGCCTCCGCTGTGGTTCTCGCCGGCGACCACTTCAAGCTTCACTTCAACGCCCTCCTCCCCGCCGTCGTCGACCGTCTCGGCGACGCCAAACAGCCGGTTCGCGACGCCGCTCGGCGACTCTTGCTCACACTTATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTAAGAGAGGAGTTTACACGAACCGTCACATCTGCAATTGATCTATTTGCATCTACCGAGCTTCCACTTCAGCGGGCTATCCTTCCTCCTGTTTTGCAGTTGCTTAGTGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATAAACAAGCTGGGCCTCAATTTCGTGATGAGCTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTTGAGGGAATTCAACCAAAAGCTCGCTCTTCAGATGGTATTTCAGGTGGTTATATTACTGGGGAAATTAAGCCTTTGAGTGCTAATCCCAAGAAAAGTAGTCCGAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGATGTAACTGTGAAACTCATAGACCCTGTCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTCCCTGAAAAAGAATGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTACTGATTATCCATGTTTCCGTGGGTTATTGAAGCAACTGGTTGGACCTCTAAGCACACAATTGTCAGACCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTCGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCTGATTGTGCAAAAAATGATCGTAGTGCCATACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAGATACATCGTTCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGTTCTACTGCAAGGATGTGTTACAGAATGTTTGCAAAAACTTGGCCAGATCGTTCTCGTCGCCTATTTTCTTCCTTTGACCCTGTTATTCAGCGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACTGATGTCATTACCCAGTCAAGCCTCTGCTCCCTCTAACCTACCTGGTTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTATATCATCAGGGACCTCTATCTCCTCTGGCATACTTCTTTCACAAGCTAAGTCACTTAGTAAGGGTACAGAACGTAGTTTGGAAAGTGTATTACATGCAAGCAAACAAAAGGTCTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTAATAAGCATAATTCATCTTCACTCCGCTCATCTAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCTTCAGTCTCCGTTTCTAATCATCTTACAAGCTCTTTAACAACAGAATCAACTTCTTCCAGTGTTAGTAAAGGTAGTAACCGAAATGGTGGTCTGGGTTTGTCTGACATAATCACTCAGATACAAGCTTCCAAAGATTCTGCCAAGTTATCATATCATAGTAATGTGAGTATGGAGCCTTTATCATCATCATCATCATATTCAAGTAAAAGGGCCTTTGAAAGATTACAAGAAAGAAATTCTATTGACGATAATGGTGATATTAGGGATTCTAAGCGATTTATGAACCCCAACCATGATAAGCAGTATTTGGATGCTCCTTATAGAGATGGAAACTTCAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTGGCTGGACGTATGTCTGCTGGTAGGCGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGTCAAATTATGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTCAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTCCAGAATTTTGAGAAGGTAATGAAGTTATTTTTCCAGCATTTGGATGATCCCCATCATAAAGTTGCGCAGGCTGCTCTCTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGCTACATGGAAAGAATATTACCCCATGTGTTTTCTCGTTTAATTGACCCTAAAGAGCTTGTTAGGCAGCCATGTTCAACAACTTTGGAAGTTGTTGGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTAGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATGCAATGAATCCAGAAGGTGCTGCCAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCAATTACATGCATTATAGCAGTGTACTCTCACTTTGATTCAACTGCAGTTCTCAATTTCATTCTTAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCACTGAAACAATACACCCCTCGCATTGAAGTTGACCTAATGAACTATTTGCAGAACAAGAAAGAGCGACAACGTTTGAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGGTATTCTGCTGGCTCTGTTGATGGTGATGGTGGCAGGAAGTGGAGTTCCCAGGATTCAACACTGGTGAAAACCAATCTTGGTCAAGCAGCTTCAAGTGAAACTCAGGAACATCTGTATCATAATCTTGGGACTGATCCTATTAGTGTTAGTCTTGGTTCAAAAACTAAAGATATTGCTTATGCAATGAATCCAGTGGGTGAAAACATTGGCTCTCAAACTAGCCAACATGGACATGTGGACAGTAGCATAAACATTGAGGGTCTTTCAACTCCTCGTCTCGATGTTAATGGTCTCATGTCATTAGAGCATTTAAATGTTCCTGAACGTTATGTCCATGACAAAGAGCATCCTTCTGAAATGGAACTTAATCATCACTCAGCTGAAGATGTAAAGATTAACTCCATGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAATGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCACTTCAACAGTTAGTTGAAGCTTCTATGACAAATGATCATTCTGTTTGGACTAAGTACTTCAATCAGATCTTGACAGTCGTGCTTGAGGTGCTGGATGATTCAGATTCCTCTGTCAGAGAGCTTTCTCTCTCCCTGATAGTCACCATGCTTAAAAATCAGAAAGATGCCATGGAAAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATCCCTAAGGTCTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACACTTGTCATTTGCATAAATTGCTTGACAAAGCTTGTGGGCCGGCTTTCTCAGGAGGAACTAATGGCTCAATTACCCTCATTTTTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGTAAGACGGTTGTTTTCTGTCTCGTGGATATTTATATCTTGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACGATATATGCAAATCGGATTTCACAAGCCAGAACAGGCAAAACAATTGATGCCGTTCATGATTAG 4341 0.4255 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCLDLLKDNNFRVSQGALQALASAVVLAGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTSAIDLFASTELPLQRAILPPVLQLLSDPNPAVREAAILCIEEMYKQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKARSSDGISGGYITGEIKPLSANPKKSSPKAKSSSRENSLFGGEGDVTVKLIDPVKVYSDKELIREIEKIASTLVPEKEWSIRIAAMQRVEGLVLGGATDYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCEYALLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPDRSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLPSQASAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLSKGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSSLRSSSLDLGVDPPSSRDPPFPASVSVSNHLTSSLTTESTSSSVSKGSNRNGGLGLSDIITQIQASKDSAKLSYHSNVSMEPLSSSSSYSSKRAFERLQERNSIDDNGDIRDSKRFMNPNHDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEMSNYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIIAVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQNKKERQRLKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSVDGDGGRKWSSQDSTLVKTNLGQAASSETQEHLYHNLGTDPISVSLGSKTKDIAYAMNPVGENIGSQTSQHGHVDSSINIEGLSTPRLDVNGLMSLEHLNVPERYVHDKEHPSEMELNHHSAEDVKINSMTDTGPSIPQILHMICNGGDGSPISSKRTALQQLVEASMTNDHSVWTKYFNQILTVVLEVLDDSDSSVRELSLSLIVTMLKNQKDAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYILLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKTIDAVHD* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0098 1446 MobiDBLite consensus disorder prediction 629 661 - -
Apr4g0098 1446 MobiDBLite consensus disorder prediction 603 619 - -
Apr4g0098 1446 MobiDBLite consensus disorder prediction 603 661 - -
Apr4g0098 1446 PANTHER CLASP 28 1438 - -
Apr4g0098 1446 MobiDBLite consensus disorder prediction 246 260 - -
Apr4g0098 1446 MobiDBLite consensus disorder prediction 707 732 - -
Apr4g0098 1446 SMART TOG_3 282 514 IPR034085 -
Apr4g0098 1446 SMART TOG_3 1202 1438 IPR034085 -
Apr4g0098 1446 SMART TOG_3 781 1026 IPR034085 -
Apr4g0098 1446 SMART TOG_3 3 224 IPR034085 -
Apr4g0098 1446 SUPERFAMILY ARM repeat 292 1436 IPR016024 -
Apr4g0098 1446 SUPERFAMILY ARM repeat 4 381 IPR016024 -
Apr4g0098 1446 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Apr4g0098 1446 Pfam CLASP N terminal 284 500 IPR024395 -
Apr4g0098 1446 Pfam CLASP N terminal 803 997 IPR024395 -
Apr4g0098 1446 Gene3D - 1229 1438 IPR011989 -
Apr4g0098 1446 Gene3D - 1 222 IPR011989 -
Apr4g0098 1446 Gene3D - 797 1021 IPR011989 -
Apr4g0098 1446 Gene3D - 267 506 IPR011989 -
Apr4g0098 1446 PANTHER PROTEIN, PUTATIVE-RELATED 28 1438 - -
Apr4g0098 1446 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Apr4g0098 1446 MobiDBLite consensus disorder prediction 235 260 - -
Apr4g0098 1446 Pfam HEAT repeat 160 188 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0098 Apr-Chr4 881701 897187 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0098 K16578 - gmx:100820523 2537.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0098 4 881701 897187 Apr4g0098 4 881701 897187 ECH
Apr4g0098 4 881701 897187 Apr8g0392 8 3326095 3341094 PCT